Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atxn1P54254 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Atxn1P54254 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.3■□□□□ 0.68
Atxn1P54254 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atxn1P54254 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Atxn1P54254 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.3■□□□□ 0.68
Atxn1P54254 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.3■□□□□ 0.68
Atxn1P54254 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atxn1P54254 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atxn1P54254 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atxn1P54254 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atxn1P54254 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atxn1P54254 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atxn1P54254 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atxn1P54254 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atxn1P54254 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Atxn1P54254 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Atxn1P54254 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Atxn1P54254 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.29■□□□□ 0.68
Atxn1P54254 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atxn1P54254 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Atxn1P54254 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atxn1P54254 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.28■□□□□ 0.68
Atxn1P54254 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Atxn1P54254 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atxn1P54254 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.28■□□□□ 0.68
Atxn1P54254 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.28■□□□□ 0.68
Atxn1P54254 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Atxn1P54254 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atxn1P54254 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Atxn1P54254 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Atxn1P54254 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Atxn1P54254 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Atxn1P54254 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atxn1P54254 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atxn1P54254 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.27■□□□□ 0.68
Atxn1P54254 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Atxn1P54254 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Atxn1P54254 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.26■□□□□ 0.67
Atxn1P54254 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atxn1P54254 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Atxn1P54254 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atxn1P54254 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atxn1P54254 Gm5408-201ENSMUST00000197998 747 ntBASIC19.26■□□□□ 0.67
Atxn1P54254 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Atxn1P54254 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Atxn1P54254 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Atxn1P54254 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atxn1P54254 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atxn1P54254 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atxn1P54254 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Atxn1P54254 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atxn1P54254 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Atxn1P54254 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atxn1P54254 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atxn1P54254 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atxn1P54254 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atxn1P54254 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.25■□□□□ 0.67
Atxn1P54254 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.25■□□□□ 0.67
Atxn1P54254 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Atxn1P54254 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atxn1P54254 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.25■□□□□ 0.67
Atxn1P54254 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Atxn1P54254 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.24■□□□□ 0.67
Atxn1P54254 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atxn1P54254 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Atxn1P54254 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Atxn1P54254 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atxn1P54254 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atxn1P54254 Gm13836-201ENSMUST00000121159 501 ntBASIC19.23■□□□□ 0.67
Atxn1P54254 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.23■□□□□ 0.67
Atxn1P54254 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Atxn1P54254 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atxn1P54254 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atxn1P54254 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atxn1P54254 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Atxn1P54254 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atxn1P54254 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atxn1P54254 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atxn1P54254 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atxn1P54254 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.22■□□□□ 0.67
Atxn1P54254 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.22■□□□□ 0.67
Atxn1P54254 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.22■□□□□ 0.67
Atxn1P54254 Gm20049-201ENSMUST00000219950 730 ntBASIC19.22■□□□□ 0.67
Atxn1P54254 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atxn1P54254 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Atxn1P54254 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atxn1P54254 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atxn1P54254 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
Atxn1P54254 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.22■□□□□ 0.67
Atxn1P54254 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atxn1P54254 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Atxn1P54254 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atxn1P54254 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.21■□□□□ 0.67
Atxn1P54254 Gm13148-201ENSMUST00000118892 745 ntBASIC19.21■□□□□ 0.67
Atxn1P54254 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atxn1P54254 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Atxn1P54254 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Atxn1P54254 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.21■□□□□ 0.67
Atxn1P54254 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms