Protein–RNA interactions for Protein: P51906

Slc1a1, Excitatory amino acid transporter 3, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a1P51906 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.4■□□□□ 0.86
Slc1a1P51906 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Slc1a1P51906 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slc1a1P51906 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slc1a1P51906 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.86
Slc1a1P51906 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc1a1P51906 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Slc1a1P51906 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.39■□□□□ 0.85
Slc1a1P51906 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Slc1a1P51906 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc1a1P51906 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc1a1P51906 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc1a1P51906 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc1a1P51906 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc1a1P51906 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc1a1P51906 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc1a1P51906 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc1a1P51906 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Slc1a1P51906 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.38■□□□□ 0.85
Slc1a1P51906 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.38■□□□□ 0.85
Slc1a1P51906 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.38■□□□□ 0.85
Slc1a1P51906 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc1a1P51906 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc1a1P51906 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc1a1P51906 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc1a1P51906 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.38■□□□□ 0.85
Slc1a1P51906 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Slc1a1P51906 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc1a1P51906 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Slc1a1P51906 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc1a1P51906 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.37■□□□□ 0.85
Slc1a1P51906 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Slc1a1P51906 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slc1a1P51906 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Slc1a1P51906 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Slc1a1P51906 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.37■□□□□ 0.85
Slc1a1P51906 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slc1a1P51906 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Slc1a1P51906 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc1a1P51906 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc1a1P51906 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.36■□□□□ 0.85
Slc1a1P51906 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc1a1P51906 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc1a1P51906 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc1a1P51906 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
Slc1a1P51906 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc1a1P51906 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Slc1a1P51906 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc1a1P51906 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc1a1P51906 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc1a1P51906 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Slc1a1P51906 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Slc1a1P51906 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc1a1P51906 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Slc1a1P51906 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc1a1P51906 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Slc1a1P51906 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc1a1P51906 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Slc1a1P51906 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc1a1P51906 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Slc1a1P51906 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Slc1a1P51906 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc1a1P51906 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc1a1P51906 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.34■□□□□ 0.85
Slc1a1P51906 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc1a1P51906 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Slc1a1P51906 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc1a1P51906 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc1a1P51906 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc1a1P51906 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Slc1a1P51906 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Slc1a1P51906 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slc1a1P51906 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slc1a1P51906 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slc1a1P51906 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.33■□□□□ 0.85
Slc1a1P51906 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slc1a1P51906 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
Slc1a1P51906 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slc1a1P51906 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slc1a1P51906 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.32■□□□□ 0.84
Slc1a1P51906 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.32■□□□□ 0.84
Slc1a1P51906 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Slc1a1P51906 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc1a1P51906 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc1a1P51906 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Slc1a1P51906 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Slc1a1P51906 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Slc1a1P51906 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
Slc1a1P51906 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.31■□□□□ 0.84
Slc1a1P51906 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc1a1P51906 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Slc1a1P51906 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Slc1a1P51906 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.31■□□□□ 0.84
Slc1a1P51906 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.31■□□□□ 0.84
Slc1a1P51906 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc1a1P51906 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc1a1P51906 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc1a1P51906 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc1a1P51906 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Slc1a1P51906 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms