Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Xcl1P47993 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Xcl1P47993 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Xcl1P47993 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Xcl1P47993 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Xcl1P47993 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Xcl1P47993 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Xcl1P47993 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Xcl1P47993 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Xcl1P47993 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Xcl1P47993 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Xcl1P47993 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Xcl1P47993 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Xcl1P47993 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Xcl1P47993 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Xcl1P47993 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Xcl1P47993 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Xcl1P47993 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Xcl1P47993 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Xcl1P47993 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Xcl1P47993 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Xcl1P47993 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Xcl1P47993 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Xcl1P47993 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Xcl1P47993 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Xcl1P47993 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Xcl1P47993 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Xcl1P47993 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC12.78□□□□□ -0.36
Xcl1P47993 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Xcl1P47993 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Xcl1P47993 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Xcl1P47993 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Xcl1P47993 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Xcl1P47993 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Xcl1P47993 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Xcl1P47993 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Xcl1P47993 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Xcl1P47993 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Xcl1P47993 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Xcl1P47993 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Xcl1P47993 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Xcl1P47993 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Xcl1P47993 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Xcl1P47993 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Xcl1P47993 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Xcl1P47993 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Xcl1P47993 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Xcl1P47993 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Xcl1P47993 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Xcl1P47993 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Xcl1P47993 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC12.76□□□□□ -0.37
Xcl1P47993 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Xcl1P47993 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Xcl1P47993 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Xcl1P47993 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Xcl1P47993 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Xcl1P47993 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Xcl1P47993 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Xcl1P47993 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Xcl1P47993 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Xcl1P47993 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Xcl1P47993 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Xcl1P47993 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Xcl1P47993 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Xcl1P47993 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Xcl1P47993 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC12.75□□□□□ -0.37
Xcl1P47993 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Xcl1P47993 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Xcl1P47993 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Xcl1P47993 AC126028.2-201ENSMUST00000228100 1833 ntBASIC12.75□□□□□ -0.37
Xcl1P47993 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Xcl1P47993 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Xcl1P47993 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Xcl1P47993 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Xcl1P47993 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Xcl1P47993 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Xcl1P47993 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Xcl1P47993 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Xcl1P47993 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC12.75□□□□□ -0.37
Xcl1P47993 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC12.75□□□□□ -0.37
Xcl1P47993 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Xcl1P47993 Gm6627-201ENSMUST00000218299 2386 ntBASIC12.74□□□□□ -0.37
Xcl1P47993 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Xcl1P47993 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Xcl1P47993 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Xcl1P47993 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Xcl1P47993 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Xcl1P47993 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Xcl1P47993 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Xcl1P47993 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Xcl1P47993 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Xcl1P47993 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Xcl1P47993 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Xcl1P47993 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Xcl1P47993 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Xcl1P47993 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Xcl1P47993 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Xcl1P47993 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Xcl1P47993 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Xcl1P47993 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms