Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Rph3aP47708 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rph3aP47708 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rph3aP47708 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rph3aP47708 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rph3aP47708 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rph3aP47708 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rph3aP47708 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Rph3aP47708 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rph3aP47708 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rph3aP47708 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rph3aP47708 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.69■□□□□ 0.58
Rph3aP47708 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rph3aP47708 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rph3aP47708 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rph3aP47708 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rph3aP47708 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rph3aP47708 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rph3aP47708 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rph3aP47708 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.68■□□□□ 0.58
Rph3aP47708 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rph3aP47708 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Rph3aP47708 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rph3aP47708 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rph3aP47708 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Rph3aP47708 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Rph3aP47708 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Rph3aP47708 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rph3aP47708 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rph3aP47708 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rph3aP47708 Gm8493-201ENSMUST00000196881 489 ntBASIC18.68■□□□□ 0.58
Rph3aP47708 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.68■□□□□ 0.58
Rph3aP47708 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rph3aP47708 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.68■□□□□ 0.58
Rph3aP47708 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.68■□□□□ 0.58
Rph3aP47708 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rph3aP47708 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.68■□□□□ 0.58
Rph3aP47708 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Rph3aP47708 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.68■□□□□ 0.58
Rph3aP47708 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rph3aP47708 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rph3aP47708 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rph3aP47708 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rph3aP47708 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rph3aP47708 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.67■□□□□ 0.58
Rph3aP47708 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rph3aP47708 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rph3aP47708 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rph3aP47708 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rph3aP47708 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rph3aP47708 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rph3aP47708 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rph3aP47708 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rph3aP47708 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rph3aP47708 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Rph3aP47708 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Rph3aP47708 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.66■□□□□ 0.58
Rph3aP47708 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rph3aP47708 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.66■□□□□ 0.58
Rph3aP47708 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rph3aP47708 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.66■□□□□ 0.58
Rph3aP47708 Gm6139-201ENSMUST00000079261 882 ntBASIC18.66■□□□□ 0.58
Rph3aP47708 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rph3aP47708 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rph3aP47708 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rph3aP47708 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.66■□□□□ 0.58
Rph3aP47708 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rph3aP47708 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rph3aP47708 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rph3aP47708 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rph3aP47708 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rph3aP47708 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rph3aP47708 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.65■□□□□ 0.58
Rph3aP47708 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Rph3aP47708 AA386476-201ENSMUST00000098781 1665 ntBASIC18.65■□□□□ 0.58
Rph3aP47708 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rph3aP47708 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rph3aP47708 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rph3aP47708 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.65■□□□□ 0.58
Rph3aP47708 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rph3aP47708 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rph3aP47708 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rph3aP47708 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Rph3aP47708 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rph3aP47708 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rph3aP47708 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.64■□□□□ 0.57
Rph3aP47708 Gm43173-201ENSMUST00000202246 593 ntBASIC18.64■□□□□ 0.57
Rph3aP47708 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.64■□□□□ 0.57
Rph3aP47708 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Rph3aP47708 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rph3aP47708 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rph3aP47708 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rph3aP47708 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rph3aP47708 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rph3aP47708 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rph3aP47708 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rph3aP47708 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rph3aP47708 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rph3aP47708 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rph3aP47708 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms