Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.68■□□□□ 0.74
Vps4bP46467 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Vps4bP46467 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps4bP46467 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Vps4bP46467 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps4bP46467 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps4bP46467 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vps4bP46467 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vps4bP46467 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Vps4bP46467 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Vps4bP46467 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vps4bP46467 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Vps4bP46467 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Vps4bP46467 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vps4bP46467 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Vps4bP46467 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vps4bP46467 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Vps4bP46467 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vps4bP46467 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps4bP46467 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps4bP46467 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps4bP46467 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps4bP46467 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps4bP46467 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.66■□□□□ 0.74
Vps4bP46467 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.66■□□□□ 0.74
Vps4bP46467 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.66■□□□□ 0.74
Vps4bP46467 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps4bP46467 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.66■□□□□ 0.74
Vps4bP46467 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps4bP46467 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps4bP46467 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.65■□□□□ 0.74
Vps4bP46467 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Vps4bP46467 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.65■□□□□ 0.74
Vps4bP46467 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps4bP46467 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Vps4bP46467 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps4bP46467 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps4bP46467 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.65■□□□□ 0.74
Vps4bP46467 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps4bP46467 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps4bP46467 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.65■□□□□ 0.74
Vps4bP46467 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Vps4bP46467 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps4bP46467 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.65■□□□□ 0.74
Vps4bP46467 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Vps4bP46467 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Vps4bP46467 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vps4bP46467 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.64■□□□□ 0.73
Vps4bP46467 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.64■□□□□ 0.73
Vps4bP46467 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.64■□□□□ 0.73
Vps4bP46467 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vps4bP46467 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Vps4bP46467 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps4bP46467 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps4bP46467 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps4bP46467 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps4bP46467 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Vps4bP46467 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.63■□□□□ 0.73
Vps4bP46467 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.63■□□□□ 0.73
Vps4bP46467 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Vps4bP46467 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
Vps4bP46467 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.63■□□□□ 0.73
Vps4bP46467 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps4bP46467 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps4bP46467 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps4bP46467 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps4bP46467 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps4bP46467 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps4bP46467 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps4bP46467 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps4bP46467 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps4bP46467 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps4bP46467 Gm12922-201ENSMUST00000120626 809 ntBASIC19.62■□□□□ 0.73
Vps4bP46467 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps4bP46467 Golgb1-201ENSMUST00000023534 498 ntBASIC19.62■□□□□ 0.73
Vps4bP46467 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps4bP46467 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps4bP46467 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps4bP46467 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Vps4bP46467 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps4bP46467 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Vps4bP46467 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Vps4bP46467 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Vps4bP46467 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.61■□□□□ 0.73
Vps4bP46467 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.61■□□□□ 0.73
Vps4bP46467 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps4bP46467 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Vps4bP46467 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps4bP46467 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Vps4bP46467 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Vps4bP46467 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps4bP46467 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps4bP46467 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps4bP46467 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps4bP46467 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Vps4bP46467 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.6■□□□□ 0.73
Vps4bP46467 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.6■□□□□ 0.73
Vps4bP46467 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.6■□□□□ 0.73
Vps4bP46467 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Vps4bP46467 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms