Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.4■□□□□ 0.54
Nkx2-6P43688 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx2-6P43688 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx2-6P43688 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx2-6P43688 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx2-6P43688 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Nkx2-6P43688 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Nkx2-6P43688 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx2-6P43688 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx2-6P43688 Reep4-203ENSMUST00000226563 1444 ntBASIC18.4■□□□□ 0.54
Nkx2-6P43688 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Nkx2-6P43688 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.39■□□□□ 0.54
Nkx2-6P43688 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-6P43688 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-6P43688 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.39■□□□□ 0.53
Nkx2-6P43688 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-6P43688 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Nkx2-6P43688 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.39■□□□□ 0.53
Nkx2-6P43688 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.53
Nkx2-6P43688 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-6P43688 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-6P43688 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-6P43688 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.39■□□□□ 0.53
Nkx2-6P43688 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-6P43688 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-6P43688 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-6P43688 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-6P43688 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-6P43688 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-6P43688 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx2-6P43688 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Nkx2-6P43688 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Nkx2-6P43688 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx2-6P43688 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx2-6P43688 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Nkx2-6P43688 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Nkx2-6P43688 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx2-6P43688 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx2-6P43688 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.38■□□□□ 0.53
Nkx2-6P43688 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx2-6P43688 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx2-6P43688 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx2-6P43688 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx2-6P43688 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx2-6P43688 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx2-6P43688 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx2-6P43688 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Nkx2-6P43688 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx2-6P43688 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx2-6P43688 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx2-6P43688 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx2-6P43688 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Nkx2-6P43688 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx2-6P43688 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx2-6P43688 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.37■□□□□ 0.53
Nkx2-6P43688 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.37■□□□□ 0.53
Nkx2-6P43688 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx2-6P43688 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Nkx2-6P43688 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx2-6P43688 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx2-6P43688 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Nkx2-6P43688 Iqck-206ENSMUST00000208658 2891 ntBASIC18.36■□□□□ 0.53
Nkx2-6P43688 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx2-6P43688 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx2-6P43688 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx2-6P43688 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.36■□□□□ 0.53
Nkx2-6P43688 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.36■□□□□ 0.53
Nkx2-6P43688 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx2-6P43688 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx2-6P43688 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx2-6P43688 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx2-6P43688 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx2-6P43688 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx2-6P43688 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx2-6P43688 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Nkx2-6P43688 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.35■□□□□ 0.53
Nkx2-6P43688 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx2-6P43688 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Nkx2-6P43688 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Nkx2-6P43688 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Nkx2-6P43688 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx2-6P43688 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx2-6P43688 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Nkx2-6P43688 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx2-6P43688 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx2-6P43688 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx2-6P43688 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Nkx2-6P43688 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Nkx2-6P43688 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.34■□□□□ 0.53
Nkx2-6P43688 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx2-6P43688 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx2-6P43688 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Nkx2-6P43688 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx2-6P43688 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx2-6P43688 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx2-6P43688 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx2-6P43688 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nkx2-6P43688 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
Nkx2-6P43688 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nkx2-6P43688 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms