Protein–RNA interactions for Protein: P43024

Cox6a1, Cytochrome c oxidase subunit 6A1, mitochondrial, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cox6a1P43024 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cox6a1P43024 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cox6a1P43024 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.55■□□□□ 0.24
Cox6a1P43024 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cox6a1P43024 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cox6a1P43024 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.55■□□□□ 0.24
Cox6a1P43024 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.55■□□□□ 0.24
Cox6a1P43024 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cox6a1P43024 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cox6a1P43024 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Cox6a1P43024 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Cox6a1P43024 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Cox6a1P43024 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cox6a1P43024 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cox6a1P43024 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cox6a1P43024 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Cox6a1P43024 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cox6a1P43024 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cox6a1P43024 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cox6a1P43024 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cox6a1P43024 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cox6a1P43024 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cox6a1P43024 Mir5133-201ENSMUST00000174955 77 ntBASIC16.54■□□□□ 0.24
Cox6a1P43024 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.54■□□□□ 0.24
Cox6a1P43024 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.54■□□□□ 0.24
Cox6a1P43024 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cox6a1P43024 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cox6a1P43024 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cox6a1P43024 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cox6a1P43024 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cox6a1P43024 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cox6a1P43024 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cox6a1P43024 AA386476-201ENSMUST00000098781 1665 ntBASIC16.53■□□□□ 0.24
Cox6a1P43024 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cox6a1P43024 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cox6a1P43024 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Cox6a1P43024 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Cox6a1P43024 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.53■□□□□ 0.24
Cox6a1P43024 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Cox6a1P43024 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Cox6a1P43024 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Cox6a1P43024 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cox6a1P43024 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cox6a1P43024 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Cox6a1P43024 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cox6a1P43024 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cox6a1P43024 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cox6a1P43024 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cox6a1P43024 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.52■□□□□ 0.24
Cox6a1P43024 Gm13146-201ENSMUST00000118508 780 ntBASIC16.52■□□□□ 0.24
Cox6a1P43024 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cox6a1P43024 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.52■□□□□ 0.24
Cox6a1P43024 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.52■□□□□ 0.24
Cox6a1P43024 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.52■□□□□ 0.24
Cox6a1P43024 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Cox6a1P43024 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cox6a1P43024 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cox6a1P43024 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.52■□□□□ 0.23
Cox6a1P43024 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Cox6a1P43024 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cox6a1P43024 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cox6a1P43024 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cox6a1P43024 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cox6a1P43024 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Cox6a1P43024 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cox6a1P43024 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
Cox6a1P43024 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cox6a1P43024 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Cox6a1P43024 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cox6a1P43024 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cox6a1P43024 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cox6a1P43024 Gm38205-201ENSMUST00000192243 258 ntBASIC16.51■□□□□ 0.23
Cox6a1P43024 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.51■□□□□ 0.23
Cox6a1P43024 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cox6a1P43024 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cox6a1P43024 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Cox6a1P43024 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cox6a1P43024 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.51■□□□□ 0.23
Cox6a1P43024 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cox6a1P43024 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cox6a1P43024 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cox6a1P43024 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cox6a1P43024 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
Cox6a1P43024 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Cox6a1P43024 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.5■□□□□ 0.23
Cox6a1P43024 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.5■□□□□ 0.23
Cox6a1P43024 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Cox6a1P43024 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cox6a1P43024 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cox6a1P43024 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Cox6a1P43024 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cox6a1P43024 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cox6a1P43024 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.49■□□□□ 0.23
Cox6a1P43024 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cox6a1P43024 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cox6a1P43024 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cox6a1P43024 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cox6a1P43024 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cox6a1P43024 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cox6a1P43024 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms