Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-2P42586 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-2P42586 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nkx2-2P42586 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Nkx2-2P42586 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nkx2-2P42586 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nkx2-2P42586 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-2P42586 Golph3-202ENSMUST00000226517 2359 ntBASIC17.89■□□□□ 0.45
Nkx2-2P42586 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
Nkx2-2P42586 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.89■□□□□ 0.45
Nkx2-2P42586 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-2P42586 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.89■□□□□ 0.45
Nkx2-2P42586 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-2P42586 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-2P42586 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-2P42586 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-2P42586 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-2P42586 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-2P42586 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-2P42586 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Nkx2-2P42586 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Nkx2-2P42586 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Nkx2-2P42586 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx2-2P42586 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.87■□□□□ 0.45
Nkx2-2P42586 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx2-2P42586 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx2-2P42586 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx2-2P42586 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx2-2P42586 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx2-2P42586 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-2P42586 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Nkx2-2P42586 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-2P42586 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
Nkx2-2P42586 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.86■□□□□ 0.45
Nkx2-2P42586 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-2P42586 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-2P42586 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-2P42586 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-2P42586 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-2P42586 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-2P42586 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-2P42586 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-2P42586 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-2P42586 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.85■□□□□ 0.45
Nkx2-2P42586 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-2P42586 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Nkx2-2P42586 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.85■□□□□ 0.45
Nkx2-2P42586 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-2P42586 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Nkx2-2P42586 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-2P42586 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-2P42586 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-2P42586 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.85■□□□□ 0.45
Nkx2-2P42586 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.84■□□□□ 0.45
Nkx2-2P42586 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-2P42586 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.84■□□□□ 0.45
Nkx2-2P42586 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-2P42586 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-2P42586 Gm11421-201ENSMUST00000122124 294 ntBASIC17.84■□□□□ 0.45
Nkx2-2P42586 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Nkx2-2P42586 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
Nkx2-2P42586 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Nkx2-2P42586 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-2P42586 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-2P42586 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-2P42586 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Nkx2-2P42586 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-2P42586 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Nkx2-2P42586 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nkx2-2P42586 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Nkx2-2P42586 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nkx2-2P42586 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Nkx2-2P42586 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.83■□□□□ 0.44
Nkx2-2P42586 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.83■□□□□ 0.44
Nkx2-2P42586 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Nkx2-2P42586 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nkx2-2P42586 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Nkx2-2P42586 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nkx2-2P42586 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nkx2-2P42586 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nkx2-2P42586 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-2P42586 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-2P42586 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-2P42586 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Nkx2-2P42586 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Nkx2-2P42586 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Nkx2-2P42586 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.82■□□□□ 0.44
Nkx2-2P42586 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-2P42586 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-2P42586 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-2P42586 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Nkx2-2P42586 Gm43017-201ENSMUST00000198296 752 ntBASIC17.81■□□□□ 0.44
Nkx2-2P42586 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Nkx2-2P42586 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-2P42586 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-2P42586 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-2P42586 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-2P42586 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-2P42586 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-2P42586 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms