Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Gm10033-202ENSMUST00000211874 928 ntBASIC16.07■□□□□ 0.16
Cdkn1aP39689 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
Cdkn1aP39689 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cdkn1aP39689 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cdkn1aP39689 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdkn1aP39689 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Cdkn1aP39689 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdkn1aP39689 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdkn1aP39689 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdkn1aP39689 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Cdkn1aP39689 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.06■□□□□ 0.16
Cdkn1aP39689 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.06■□□□□ 0.16
Cdkn1aP39689 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.06■□□□□ 0.16
Cdkn1aP39689 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.06■□□□□ 0.16
Cdkn1aP39689 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdkn1aP39689 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkn1aP39689 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkn1aP39689 Reep4-203ENSMUST00000226563 1444 ntBASIC16.05■□□□□ 0.16
Cdkn1aP39689 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkn1aP39689 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkn1aP39689 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkn1aP39689 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Cdkn1aP39689 Gm27405-201ENSMUST00000184201 112 ntBASIC16.05■□□□□ 0.16
Cdkn1aP39689 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.05■□□□□ 0.16
Cdkn1aP39689 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkn1aP39689 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkn1aP39689 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkn1aP39689 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdkn1aP39689 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.05■□□□□ 0.16
Cdkn1aP39689 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdkn1aP39689 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cdkn1aP39689 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdkn1aP39689 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Cdkn1aP39689 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.04■□□□□ 0.16
Cdkn1aP39689 Gm10849-201ENSMUST00000100397 618 ntBASIC16.04■□□□□ 0.16
Cdkn1aP39689 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cdkn1aP39689 AV356131-201ENSMUST00000206201 750 ntBASIC16.04■□□□□ 0.16
Cdkn1aP39689 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdkn1aP39689 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Cdkn1aP39689 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.04■□□□□ 0.16
Cdkn1aP39689 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Cdkn1aP39689 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cdkn1aP39689 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdkn1aP39689 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdkn1aP39689 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cdkn1aP39689 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkn1aP39689 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Cdkn1aP39689 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkn1aP39689 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.03■□□□□ 0.16
Cdkn1aP39689 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkn1aP39689 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Cdkn1aP39689 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkn1aP39689 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.03■□□□□ 0.16
Cdkn1aP39689 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.03■□□□□ 0.16
Cdkn1aP39689 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Cdkn1aP39689 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkn1aP39689 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.03■□□□□ 0.16
Cdkn1aP39689 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkn1aP39689 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.03■□□□□ 0.16
Cdkn1aP39689 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkn1aP39689 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.03■□□□□ 0.16
Cdkn1aP39689 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.03■□□□□ 0.16
Cdkn1aP39689 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.03■□□□□ 0.16
Cdkn1aP39689 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkn1aP39689 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Cdkn1aP39689 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkn1aP39689 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkn1aP39689 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkn1aP39689 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cdkn1aP39689 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdkn1aP39689 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.02■□□□□ 0.16
Cdkn1aP39689 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.02■□□□□ 0.16
Cdkn1aP39689 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdkn1aP39689 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdkn1aP39689 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdkn1aP39689 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cdkn1aP39689 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Cdkn1aP39689 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cdkn1aP39689 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.02■□□□□ 0.15
Cdkn1aP39689 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Cdkn1aP39689 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cdkn1aP39689 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Cdkn1aP39689 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdkn1aP39689 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdkn1aP39689 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdkn1aP39689 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdkn1aP39689 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Cdkn1aP39689 Gm13234-201ENSMUST00000120010 747 ntBASIC16.01■□□□□ 0.15
Cdkn1aP39689 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.01■□□□□ 0.15
Cdkn1aP39689 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdkn1aP39689 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdkn1aP39689 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Cdkn1aP39689 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdkn1aP39689 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdkn1aP39689 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdkn1aP39689 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Cdkn1aP39689 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cdkn1aP39689 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16■□□□□ 0.15
Cdkn1aP39689 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
Cdkn1aP39689 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms