Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HmgclP38060 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HmgclP38060 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
HmgclP38060 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HmgclP38060 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HmgclP38060 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HmgclP38060 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
HmgclP38060 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HmgclP38060 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HmgclP38060 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HmgclP38060 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HmgclP38060 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
HmgclP38060 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HmgclP38060 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.2■□□□□ 0.66
HmgclP38060 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HmgclP38060 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HmgclP38060 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HmgclP38060 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HmgclP38060 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HmgclP38060 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HmgclP38060 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
HmgclP38060 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HmgclP38060 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HmgclP38060 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
HmgclP38060 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HmgclP38060 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HmgclP38060 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HmgclP38060 Golph3-202ENSMUST00000226517 2359 ntBASIC19.19■□□□□ 0.66
HmgclP38060 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HmgclP38060 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HmgclP38060 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
HmgclP38060 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HmgclP38060 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
HmgclP38060 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.18■□□□□ 0.66
HmgclP38060 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HmgclP38060 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HmgclP38060 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HmgclP38060 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HmgclP38060 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HmgclP38060 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
HmgclP38060 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
HmgclP38060 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
HmgclP38060 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.17■□□□□ 0.66
HmgclP38060 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
HmgclP38060 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HmgclP38060 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
HmgclP38060 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
HmgclP38060 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
HmgclP38060 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HmgclP38060 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
HmgclP38060 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
HmgclP38060 Gm11421-201ENSMUST00000122124 294 ntBASIC19.16■□□□□ 0.66
HmgclP38060 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.16■□□□□ 0.66
HmgclP38060 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
HmgclP38060 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
HmgclP38060 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
HmgclP38060 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HmgclP38060 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HmgclP38060 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HmgclP38060 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HmgclP38060 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HmgclP38060 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HmgclP38060 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.15■□□□□ 0.66
HmgclP38060 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
HmgclP38060 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
HmgclP38060 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HmgclP38060 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
HmgclP38060 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HmgclP38060 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
HmgclP38060 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
HmgclP38060 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HmgclP38060 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
HmgclP38060 Gm43017-201ENSMUST00000198296 752 ntBASIC19.14■□□□□ 0.65
HmgclP38060 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
HmgclP38060 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
HmgclP38060 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.14■□□□□ 0.65
HmgclP38060 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HmgclP38060 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HmgclP38060 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
HmgclP38060 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HmgclP38060 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HmgclP38060 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.13■□□□□ 0.65
HmgclP38060 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
HmgclP38060 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HmgclP38060 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.13■□□□□ 0.65
HmgclP38060 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HmgclP38060 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HmgclP38060 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HmgclP38060 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HmgclP38060 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
HmgclP38060 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HmgclP38060 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HmgclP38060 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HmgclP38060 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HmgclP38060 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HmgclP38060 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HmgclP38060 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HmgclP38060 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HmgclP38060 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HmgclP38060 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms