Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LdlrP35951 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.31■□□□□ 0.68
LdlrP35951 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LdlrP35951 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LdlrP35951 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LdlrP35951 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
LdlrP35951 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LdlrP35951 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LdlrP35951 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LdlrP35951 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LdlrP35951 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LdlrP35951 Gm8495-201ENSMUST00000188740 694 ntBASIC19.3■□□□□ 0.68
LdlrP35951 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.3■□□□□ 0.68
LdlrP35951 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LdlrP35951 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
LdlrP35951 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
LdlrP35951 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
LdlrP35951 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
LdlrP35951 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LdlrP35951 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.29■□□□□ 0.68
LdlrP35951 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.29■□□□□ 0.68
LdlrP35951 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LdlrP35951 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LdlrP35951 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
LdlrP35951 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LdlrP35951 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
LdlrP35951 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
LdlrP35951 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
LdlrP35951 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
LdlrP35951 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
LdlrP35951 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LdlrP35951 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LdlrP35951 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LdlrP35951 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
LdlrP35951 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LdlrP35951 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LdlrP35951 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LdlrP35951 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LdlrP35951 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LdlrP35951 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LdlrP35951 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LdlrP35951 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LdlrP35951 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
LdlrP35951 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LdlrP35951 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LdlrP35951 Gm43530-201ENSMUST00000195920 274 ntBASIC19.27■□□□□ 0.68
LdlrP35951 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
LdlrP35951 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LdlrP35951 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
LdlrP35951 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LdlrP35951 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
LdlrP35951 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
LdlrP35951 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
LdlrP35951 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
LdlrP35951 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LdlrP35951 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LdlrP35951 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.26■□□□□ 0.67
LdlrP35951 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LdlrP35951 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
LdlrP35951 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LdlrP35951 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LdlrP35951 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LdlrP35951 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LdlrP35951 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.26■□□□□ 0.67
LdlrP35951 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.26■□□□□ 0.67
LdlrP35951 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LdlrP35951 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LdlrP35951 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LdlrP35951 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
LdlrP35951 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LdlrP35951 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LdlrP35951 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
LdlrP35951 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LdlrP35951 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LdlrP35951 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LdlrP35951 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.25■□□□□ 0.67
LdlrP35951 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LdlrP35951 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LdlrP35951 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LdlrP35951 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LdlrP35951 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
LdlrP35951 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LdlrP35951 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LdlrP35951 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LdlrP35951 Gm18284-201ENSMUST00000172604 624 ntBASIC19.24■□□□□ 0.67
LdlrP35951 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.24■□□□□ 0.67
LdlrP35951 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LdlrP35951 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LdlrP35951 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LdlrP35951 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
LdlrP35951 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
LdlrP35951 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
LdlrP35951 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LdlrP35951 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
LdlrP35951 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.23■□□□□ 0.67
LdlrP35951 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LdlrP35951 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LdlrP35951 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LdlrP35951 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.23■□□□□ 0.67
LdlrP35951 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms