Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mmp3P28862 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Mmp3P28862 Gm13146-201ENSMUST00000118508 780 ntBASIC20.95■□□□□ 0.94
Mmp3P28862 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Mmp3P28862 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.95■□□□□ 0.94
Mmp3P28862 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mmp3P28862 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Mmp3P28862 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mmp3P28862 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Mmp3P28862 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mmp3P28862 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Mmp3P28862 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.94■□□□□ 0.94
Mmp3P28862 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.94■□□□□ 0.94
Mmp3P28862 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.94■□□□□ 0.94
Mmp3P28862 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Mmp3P28862 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Mmp3P28862 Gm12933-201ENSMUST00000120203 872 ntBASIC20.93■□□□□ 0.94
Mmp3P28862 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.93■□□□□ 0.94
Mmp3P28862 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.93■□□□□ 0.94
Mmp3P28862 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mmp3P28862 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.93■□□□□ 0.94
Mmp3P28862 Gm10602-201ENSMUST00000098239 609 ntBASIC20.93■□□□□ 0.94
Mmp3P28862 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.93■□□□□ 0.94
Mmp3P28862 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Mmp3P28862 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Mmp3P28862 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
Mmp3P28862 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mmp3P28862 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mmp3P28862 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mmp3P28862 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Mmp3P28862 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mmp3P28862 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Mmp3P28862 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Mmp3P28862 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Mmp3P28862 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.92■□□□□ 0.94
Mmp3P28862 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Mmp3P28862 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Mmp3P28862 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Mmp3P28862 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Mmp3P28862 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Mmp3P28862 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Mmp3P28862 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.91■□□□□ 0.94
Mmp3P28862 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Mmp3P28862 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Mmp3P28862 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
Mmp3P28862 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Mmp3P28862 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Mmp3P28862 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Mmp3P28862 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mmp3P28862 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mmp3P28862 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mmp3P28862 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Mmp3P28862 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mmp3P28862 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mmp3P28862 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
Mmp3P28862 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Mmp3P28862 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.9■□□□□ 0.94
Mmp3P28862 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Mmp3P28862 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.9■□□□□ 0.94
Mmp3P28862 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.9■□□□□ 0.94
Mmp3P28862 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mmp3P28862 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
Mmp3P28862 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Mmp3P28862 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mmp3P28862 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Mmp3P28862 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mmp3P28862 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Mmp3P28862 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Mmp3P28862 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.89■□□□□ 0.93
Mmp3P28862 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Mmp3P28862 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.89■□□□□ 0.93
Mmp3P28862 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Mmp3P28862 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Mmp3P28862 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Mmp3P28862 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Mmp3P28862 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Mmp3P28862 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Mmp3P28862 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Mmp3P28862 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Mmp3P28862 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Mmp3P28862 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.88■□□□□ 0.93
Mmp3P28862 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.88■□□□□ 0.93
Mmp3P28862 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Mmp3P28862 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Mmp3P28862 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Mmp3P28862 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.88■□□□□ 0.93
Mmp3P28862 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Mmp3P28862 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Mmp3P28862 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.87■□□□□ 0.93
Mmp3P28862 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Mmp3P28862 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Mmp3P28862 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.87■□□□□ 0.93
Mmp3P28862 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mmp3P28862 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Mmp3P28862 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mmp3P28862 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mmp3P28862 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mmp3P28862 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.85■□□□□ 0.93
Mmp3P28862 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Mmp3P28862 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms