Protein–RNA interactions for Protein: P28653

Bgn, Biglycan, mousemouse

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BgnP28653 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BgnP28653 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BgnP28653 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
BgnP28653 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18■□□□□ 0.47
BgnP28653 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BgnP28653 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BgnP28653 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
BgnP28653 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
BgnP28653 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18■□□□□ 0.47
BgnP28653 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
BgnP28653 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18■□□□□ 0.47
BgnP28653 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
BgnP28653 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BgnP28653 Rarb-207ENSMUST00000225921 2756 ntBASIC18■□□□□ 0.47
BgnP28653 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
BgnP28653 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
BgnP28653 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
BgnP28653 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
BgnP28653 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BgnP28653 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BgnP28653 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BgnP28653 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BgnP28653 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BgnP28653 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BgnP28653 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
BgnP28653 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
BgnP28653 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
BgnP28653 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BgnP28653 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BgnP28653 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
BgnP28653 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BgnP28653 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
BgnP28653 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
BgnP28653 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BgnP28653 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.97■□□□□ 0.47
BgnP28653 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BgnP28653 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.97■□□□□ 0.47
BgnP28653 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
BgnP28653 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
BgnP28653 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.97■□□□□ 0.47
BgnP28653 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
BgnP28653 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BgnP28653 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.97■□□□□ 0.47
BgnP28653 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
BgnP28653 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BgnP28653 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BgnP28653 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BgnP28653 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BgnP28653 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
BgnP28653 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.96■□□□□ 0.47
BgnP28653 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BgnP28653 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BgnP28653 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BgnP28653 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
BgnP28653 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.96■□□□□ 0.47
BgnP28653 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BgnP28653 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
BgnP28653 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
BgnP28653 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
BgnP28653 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.95■□□□□ 0.46
BgnP28653 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BgnP28653 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
BgnP28653 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.95■□□□□ 0.46
BgnP28653 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BgnP28653 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.95■□□□□ 0.46
BgnP28653 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BgnP28653 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.95■□□□□ 0.46
BgnP28653 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
BgnP28653 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BgnP28653 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
BgnP28653 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
BgnP28653 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BgnP28653 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BgnP28653 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.95■□□□□ 0.46
BgnP28653 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
BgnP28653 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BgnP28653 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
BgnP28653 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.95■□□□□ 0.46
BgnP28653 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
BgnP28653 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.95■□□□□ 0.46
BgnP28653 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.95■□□□□ 0.46
BgnP28653 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.94■□□□□ 0.46
BgnP28653 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
BgnP28653 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
BgnP28653 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BgnP28653 Gm11175-201ENSMUST00000116172 543 ntBASIC17.94■□□□□ 0.46
BgnP28653 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
BgnP28653 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BgnP28653 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BgnP28653 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BgnP28653 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
BgnP28653 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
BgnP28653 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
BgnP28653 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BgnP28653 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
BgnP28653 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
BgnP28653 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BgnP28653 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BgnP28653 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
BgnP28653 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms