Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.13■□□□□ 0.01
Ccl6P27784 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ccl6P27784 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccl6P27784 Gm43034-201ENSMUST00000198678 1364 ntBASIC15.12■□□□□ 0.01
Ccl6P27784 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.12■□□□□ 0.01
Ccl6P27784 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC15.12■□□□□ 0.01
Ccl6P27784 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Ccl6P27784 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccl6P27784 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC15.12■□□□□ 0.01
Ccl6P27784 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC15.12■□□□□ 0.01
Ccl6P27784 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Ccl6P27784 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ccl6P27784 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccl6P27784 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccl6P27784 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccl6P27784 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccl6P27784 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccl6P27784 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccl6P27784 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccl6P27784 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC15.11■□□□□ 0.01
Ccl6P27784 Gm13241-201ENSMUST00000094493 780 ntBASIC15.11■□□□□ 0.01
Ccl6P27784 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.11■□□□□ 0.01
Ccl6P27784 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccl6P27784 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ccl6P27784 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccl6P27784 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC15.1■□□□□ 0.01
Ccl6P27784 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccl6P27784 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccl6P27784 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ccl6P27784 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccl6P27784 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccl6P27784 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccl6P27784 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccl6P27784 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccl6P27784 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Ccl6P27784 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Ccl6P27784 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccl6P27784 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccl6P27784 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ccl6P27784 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccl6P27784 Gm6085-201ENSMUST00000182774 1470 ntBASIC15.09■□□□□ 0.01
Ccl6P27784 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccl6P27784 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccl6P27784 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC15.09■□□□□ 0.01
Ccl6P27784 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
Ccl6P27784 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccl6P27784 Gm43137-201ENSMUST00000198052 594 ntBASIC15.09■□□□□ 0.01
Ccl6P27784 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccl6P27784 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
Ccl6P27784 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ccl6P27784 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccl6P27784 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccl6P27784 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ccl6P27784 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.09■□□□□ 0.01
Ccl6P27784 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.08■□□□□ 0.01
Ccl6P27784 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.08■□□□□ 0
Ccl6P27784 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ccl6P27784 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ccl6P27784 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ccl6P27784 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC15.08■□□□□ 0
Ccl6P27784 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC15.08■□□□□ 0
Ccl6P27784 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ccl6P27784 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ccl6P27784 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ccl6P27784 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Ccl6P27784 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ccl6P27784 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Ccl6P27784 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ccl6P27784 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ccl6P27784 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Ccl6P27784 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ccl6P27784 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccl6P27784 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ccl6P27784 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ccl6P27784 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccl6P27784 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccl6P27784 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ccl6P27784 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Ccl6P27784 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccl6P27784 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccl6P27784 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccl6P27784 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ccl6P27784 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ccl6P27784 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccl6P27784 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ccl6P27784 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Ccl6P27784 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC15.06■□□□□ 0
Ccl6P27784 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccl6P27784 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC15.06■□□□□ 0
Ccl6P27784 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccl6P27784 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Ccl6P27784 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ccl6P27784 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ccl6P27784 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Ccl6P27784 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccl6P27784 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ccl6P27784 Gm10209-201ENSMUST00000203397 1607 ntBASIC15.06■□□□□ 0
Ccl6P27784 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccl6P27784 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ccl6P27784 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms