Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cd40P27512 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cd40P27512 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd40P27512 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.63■□□□□ 0.41
Cd40P27512 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.63■□□□□ 0.41
Cd40P27512 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Cd40P27512 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd40P27512 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cd40P27512 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd40P27512 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd40P27512 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Cd40P27512 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Cd40P27512 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd40P27512 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd40P27512 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Cd40P27512 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd40P27512 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd40P27512 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Cd40P27512 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd40P27512 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Cd40P27512 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd40P27512 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd40P27512 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd40P27512 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd40P27512 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Cd40P27512 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd40P27512 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Cd40P27512 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Cd40P27512 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd40P27512 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd40P27512 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd40P27512 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd40P27512 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd40P27512 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cd40P27512 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd40P27512 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cd40P27512 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Cd40P27512 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd40P27512 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
Cd40P27512 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd40P27512 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.6■□□□□ 0.41
Cd40P27512 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Cd40P27512 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Cd40P27512 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd40P27512 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.6■□□□□ 0.41
Cd40P27512 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.6■□□□□ 0.41
Cd40P27512 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd40P27512 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd40P27512 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd40P27512 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd40P27512 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd40P27512 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd40P27512 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd40P27512 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cd40P27512 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd40P27512 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd40P27512 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cd40P27512 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.59■□□□□ 0.41
Cd40P27512 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.59■□□□□ 0.41
Cd40P27512 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd40P27512 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Cd40P27512 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd40P27512 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cd40P27512 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd40P27512 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cd40P27512 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cd40P27512 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Cd40P27512 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.58■□□□□ 0.41
Cd40P27512 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd40P27512 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd40P27512 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.58■□□□□ 0.4
Cd40P27512 Gm40848-201ENSMUST00000221998 324 ntBASIC17.58■□□□□ 0.4
Cd40P27512 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cd40P27512 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd40P27512 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.58■□□□□ 0.4
Cd40P27512 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd40P27512 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd40P27512 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cd40P27512 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd40P27512 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd40P27512 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd40P27512 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd40P27512 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Cd40P27512 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.57■□□□□ 0.4
Cd40P27512 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cd40P27512 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd40P27512 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.57■□□□□ 0.4
Cd40P27512 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cd40P27512 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd40P27512 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.56■□□□□ 0.4
Cd40P27512 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.56■□□□□ 0.4
Cd40P27512 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd40P27512 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd40P27512 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.56■□□□□ 0.4
Cd40P27512 Gm27801-201ENSMUST00000184174 223 ntBASIC17.56■□□□□ 0.4
Cd40P27512 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.56■□□□□ 0.4
Cd40P27512 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.56■□□□□ 0.4
Cd40P27512 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Cd40P27512 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd40P27512 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms