Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Col8a2P25318 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Col8a2P25318 Gm10493-201ENSMUST00000097270 612 ntBASIC16.31■□□□□ 0.2
Col8a2P25318 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.31■□□□□ 0.2
Col8a2P25318 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col8a2P25318 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Col8a2P25318 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col8a2P25318 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col8a2P25318 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col8a2P25318 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col8a2P25318 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.3■□□□□ 0.2
Col8a2P25318 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.3■□□□□ 0.2
Col8a2P25318 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Col8a2P25318 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col8a2P25318 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col8a2P25318 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col8a2P25318 AA386476-201ENSMUST00000098781 1665 ntBASIC16.3■□□□□ 0.2
Col8a2P25318 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col8a2P25318 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col8a2P25318 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col8a2P25318 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Col8a2P25318 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Col8a2P25318 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Col8a2P25318 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col8a2P25318 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col8a2P25318 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col8a2P25318 Gm42642-201ENSMUST00000200683 355 ntBASIC16.29■□□□□ 0.2
Col8a2P25318 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col8a2P25318 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col8a2P25318 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col8a2P25318 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Col8a2P25318 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col8a2P25318 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col8a2P25318 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Col8a2P25318 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col8a2P25318 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col8a2P25318 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col8a2P25318 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col8a2P25318 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col8a2P25318 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Col8a2P25318 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col8a2P25318 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.28■□□□□ 0.2
Col8a2P25318 Gm9988-201ENSMUST00000069786 435 ntBASIC16.28■□□□□ 0.2
Col8a2P25318 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col8a2P25318 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Col8a2P25318 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col8a2P25318 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Col8a2P25318 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col8a2P25318 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Col8a2P25318 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col8a2P25318 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col8a2P25318 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Col8a2P25318 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Col8a2P25318 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.27■□□□□ 0.2
Col8a2P25318 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col8a2P25318 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Col8a2P25318 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Col8a2P25318 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.19
Col8a2P25318 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
Col8a2P25318 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Col8a2P25318 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.27■□□□□ 0.19
Col8a2P25318 Reep4-203ENSMUST00000226563 1444 ntBASIC16.27■□□□□ 0.19
Col8a2P25318 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col8a2P25318 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Col8a2P25318 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col8a2P25318 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col8a2P25318 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col8a2P25318 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col8a2P25318 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col8a2P25318 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.26■□□□□ 0.19
Col8a2P25318 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.26■□□□□ 0.19
Col8a2P25318 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col8a2P25318 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col8a2P25318 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.26■□□□□ 0.19
Col8a2P25318 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col8a2P25318 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col8a2P25318 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.26■□□□□ 0.19
Col8a2P25318 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col8a2P25318 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col8a2P25318 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col8a2P25318 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col8a2P25318 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.25■□□□□ 0.19
Col8a2P25318 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col8a2P25318 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col8a2P25318 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col8a2P25318 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Col8a2P25318 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Col8a2P25318 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col8a2P25318 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Col8a2P25318 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Col8a2P25318 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col8a2P25318 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col8a2P25318 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.24■□□□□ 0.19
Col8a2P25318 Gm29257-201ENSMUST00000186115 639 ntBASIC16.24■□□□□ 0.19
Col8a2P25318 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Col8a2P25318 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.24■□□□□ 0.19
Col8a2P25318 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col8a2P25318 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col8a2P25318 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col8a2P25318 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms