Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rb1P13405 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.71■□□□□ 0.75
Rb1P13405 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rb1P13405 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rb1P13405 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Rb1P13405 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rb1P13405 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rb1P13405 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rb1P13405 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rb1P13405 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rb1P13405 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.71■□□□□ 0.75
Rb1P13405 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rb1P13405 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.71■□□□□ 0.75
Rb1P13405 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rb1P13405 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rb1P13405 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rb1P13405 AV356131-201ENSMUST00000206201 750 ntBASIC19.71■□□□□ 0.75
Rb1P13405 Gm10033-202ENSMUST00000211874 928 ntBASIC19.71■□□□□ 0.75
Rb1P13405 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rb1P13405 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rb1P13405 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rb1P13405 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rb1P13405 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rb1P13405 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rb1P13405 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rb1P13405 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rb1P13405 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rb1P13405 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rb1P13405 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rb1P13405 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Rb1P13405 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rb1P13405 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rb1P13405 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.7■□□□□ 0.74
Rb1P13405 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rb1P13405 Gm42778-201ENSMUST00000199644 553 ntBASIC19.7■□□□□ 0.74
Rb1P13405 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.7■□□□□ 0.74
Rb1P13405 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.7■□□□□ 0.74
Rb1P13405 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rb1P13405 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rb1P13405 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rb1P13405 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.7■□□□□ 0.74
Rb1P13405 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rb1P13405 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rb1P13405 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rb1P13405 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rb1P13405 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rb1P13405 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.69■□□□□ 0.74
Rb1P13405 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rb1P13405 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rb1P13405 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rb1P13405 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.69■□□□□ 0.74
Rb1P13405 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.69■□□□□ 0.74
Rb1P13405 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rb1P13405 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rb1P13405 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rb1P13405 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rb1P13405 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rb1P13405 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rb1P13405 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rb1P13405 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rb1P13405 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rb1P13405 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rb1P13405 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rb1P13405 Gm11421-201ENSMUST00000122124 294 ntBASIC19.67■□□□□ 0.74
Rb1P13405 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rb1P13405 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rb1P13405 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.67■□□□□ 0.74
Rb1P13405 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rb1P13405 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rb1P13405 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rb1P13405 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Rb1P13405 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rb1P13405 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rb1P13405 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rb1P13405 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rb1P13405 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Rb1P13405 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.66■□□□□ 0.74
Rb1P13405 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rb1P13405 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rb1P13405 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rb1P13405 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rb1P13405 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rb1P13405 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rb1P13405 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rb1P13405 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rb1P13405 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rb1P13405 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.66■□□□□ 0.74
Rb1P13405 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rb1P13405 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rb1P13405 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rb1P13405 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Rb1P13405 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rb1P13405 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rb1P13405 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rb1P13405 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.65■□□□□ 0.74
Rb1P13405 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rb1P13405 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rb1P13405 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.65■□□□□ 0.74
Rb1P13405 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rb1P13405 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms