Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccl3P10855 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ccl3P10855 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ccl3P10855 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccl3P10855 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccl3P10855 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccl3P10855 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccl3P10855 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccl3P10855 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccl3P10855 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Ccl3P10855 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Ccl3P10855 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Ccl3P10855 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccl3P10855 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccl3P10855 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccl3P10855 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.3■□□□□ 0.36
Ccl3P10855 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.3■□□□□ 0.36
Ccl3P10855 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Ccl3P10855 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccl3P10855 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccl3P10855 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.29■□□□□ 0.36
Ccl3P10855 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Ccl3P10855 Gm6211-202ENSMUST00000167849 925 ntBASIC17.29■□□□□ 0.36
Ccl3P10855 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ccl3P10855 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccl3P10855 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccl3P10855 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccl3P10855 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.29■□□□□ 0.36
Ccl3P10855 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccl3P10855 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccl3P10855 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Ccl3P10855 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccl3P10855 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Ccl3P10855 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ccl3P10855 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccl3P10855 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccl3P10855 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ccl3P10855 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccl3P10855 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccl3P10855 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccl3P10855 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ccl3P10855 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ccl3P10855 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccl3P10855 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccl3P10855 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccl3P10855 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccl3P10855 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ccl3P10855 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccl3P10855 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccl3P10855 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Ccl3P10855 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccl3P10855 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.28■□□□□ 0.36
Ccl3P10855 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccl3P10855 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.27■□□□□ 0.36
Ccl3P10855 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccl3P10855 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccl3P10855 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.27■□□□□ 0.36
Ccl3P10855 Gm8520-201ENSMUST00000186517 868 ntBASIC17.27■□□□□ 0.36
Ccl3P10855 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Ccl3P10855 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccl3P10855 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ccl3P10855 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.27■□□□□ 0.36
Ccl3P10855 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ccl3P10855 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccl3P10855 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Ccl3P10855 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.27■□□□□ 0.35
Ccl3P10855 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccl3P10855 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccl3P10855 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccl3P10855 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccl3P10855 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccl3P10855 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccl3P10855 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccl3P10855 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccl3P10855 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccl3P10855 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.26■□□□□ 0.35
Ccl3P10855 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Ccl3P10855 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccl3P10855 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ccl3P10855 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccl3P10855 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Ccl3P10855 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.25■□□□□ 0.35
Ccl3P10855 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.25■□□□□ 0.35
Ccl3P10855 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccl3P10855 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ccl3P10855 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccl3P10855 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccl3P10855 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccl3P10855 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Ccl3P10855 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccl3P10855 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccl3P10855 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Ccl3P10855 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccl3P10855 Gm20049-201ENSMUST00000219950 730 ntBASIC17.24■□□□□ 0.35
Ccl3P10855 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccl3P10855 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccl3P10855 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccl3P10855 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccl3P10855 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccl3P10855 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms