Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hoxc8P09025 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Hoxc8P09025 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hoxc8P09025 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hoxc8P09025 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC21.04■□□□□ 0.96
Hoxc8P09025 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Hoxc8P09025 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Hoxc8P09025 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Hoxc8P09025 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC21.03■□□□□ 0.96
Hoxc8P09025 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hoxc8P09025 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hoxc8P09025 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hoxc8P09025 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Hoxc8P09025 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hoxc8P09025 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hoxc8P09025 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hoxc8P09025 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Hoxc8P09025 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hoxc8P09025 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hoxc8P09025 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Hoxc8P09025 Gm7860-201ENSMUST00000121190 879 ntBASIC21.01■□□□□ 0.95
Hoxc8P09025 Gm6211-202ENSMUST00000167849 925 ntBASIC21.01■□□□□ 0.95
Hoxc8P09025 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hoxc8P09025 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hoxc8P09025 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Hoxc8P09025 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Hoxc8P09025 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Hoxc8P09025 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Hoxc8P09025 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC21■□□□□ 0.95
Hoxc8P09025 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21■□□□□ 0.95
Hoxc8P09025 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hoxc8P09025 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21■□□□□ 0.95
Hoxc8P09025 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hoxc8P09025 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hoxc8P09025 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21■□□□□ 0.95
Hoxc8P09025 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hoxc8P09025 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.99■□□□□ 0.95
Hoxc8P09025 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Hoxc8P09025 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.99■□□□□ 0.95
Hoxc8P09025 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hoxc8P09025 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Hoxc8P09025 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hoxc8P09025 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hoxc8P09025 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.98■□□□□ 0.95
Hoxc8P09025 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Hoxc8P09025 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hoxc8P09025 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.98■□□□□ 0.95
Hoxc8P09025 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hoxc8P09025 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxc8P09025 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxc8P09025 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxc8P09025 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxc8P09025 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxc8P09025 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxc8P09025 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Hoxc8P09025 Gm20760-201ENSMUST00000179197 648 ntBASIC20.96■□□□□ 0.95
Hoxc8P09025 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Hoxc8P09025 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.96■□□□□ 0.95
Hoxc8P09025 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Hoxc8P09025 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
Hoxc8P09025 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Hoxc8P09025 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Hoxc8P09025 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Hoxc8P09025 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Hoxc8P09025 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.95■□□□□ 0.94
Hoxc8P09025 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Hoxc8P09025 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hoxc8P09025 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Hoxc8P09025 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hoxc8P09025 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxc8P09025 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxc8P09025 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxc8P09025 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.94■□□□□ 0.94
Hoxc8P09025 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxc8P09025 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.94■□□□□ 0.94
Hoxc8P09025 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxc8P09025 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxc8P09025 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxc8P09025 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxc8P09025 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxc8P09025 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxc8P09025 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxc8P09025 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxc8P09025 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.93■□□□□ 0.94
Hoxc8P09025 Gm5408-201ENSMUST00000197998 747 ntBASIC20.93■□□□□ 0.94
Hoxc8P09025 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.93■□□□□ 0.94
Hoxc8P09025 Gm20049-201ENSMUST00000219950 730 ntBASIC20.93■□□□□ 0.94
Hoxc8P09025 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxc8P09025 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxc8P09025 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Hoxc8P09025 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxc8P09025 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
Hoxc8P09025 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxc8P09025 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxc8P09025 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.92■□□□□ 0.94
Hoxc8P09025 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Hoxc8P09025 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxc8P09025 Gm26524-201ENSMUST00000192339 390 ntBASIC20.92■□□□□ 0.94
Hoxc8P09025 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.92■□□□□ 0.94
Hoxc8P09025 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms