Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
ApoeP08226 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ApoeP08226 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ApoeP08226 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ApoeP08226 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ApoeP08226 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ApoeP08226 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ApoeP08226 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.37■□□□□ 0.53
ApoeP08226 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ApoeP08226 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ApoeP08226 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ApoeP08226 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.36■□□□□ 0.53
ApoeP08226 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
ApoeP08226 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
ApoeP08226 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ApoeP08226 Gm10232-201ENSMUST00000089221 720 ntBASIC18.36■□□□□ 0.53
ApoeP08226 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ApoeP08226 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ApoeP08226 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
ApoeP08226 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
ApoeP08226 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ApoeP08226 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.35■□□□□ 0.53
ApoeP08226 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ApoeP08226 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ApoeP08226 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ApoeP08226 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ApoeP08226 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ApoeP08226 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ApoeP08226 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.35■□□□□ 0.53
ApoeP08226 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ApoeP08226 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ApoeP08226 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ApoeP08226 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ApoeP08226 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ApoeP08226 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ApoeP08226 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ApoeP08226 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ApoeP08226 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ApoeP08226 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.34■□□□□ 0.53
ApoeP08226 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
ApoeP08226 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ApoeP08226 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ApoeP08226 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.34■□□□□ 0.53
ApoeP08226 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ApoeP08226 BC021767-201ENSMUST00000126387 1716 ntBASIC18.34■□□□□ 0.53
ApoeP08226 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ApoeP08226 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ApoeP08226 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ApoeP08226 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
ApoeP08226 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ApoeP08226 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ApoeP08226 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
ApoeP08226 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ApoeP08226 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ApoeP08226 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ApoeP08226 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
ApoeP08226 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ApoeP08226 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ApoeP08226 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.33■□□□□ 0.52
ApoeP08226 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ApoeP08226 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
ApoeP08226 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ApoeP08226 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ApoeP08226 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ApoeP08226 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
ApoeP08226 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ApoeP08226 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ApoeP08226 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ApoeP08226 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ApoeP08226 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ApoeP08226 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ApoeP08226 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ApoeP08226 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ApoeP08226 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.32■□□□□ 0.52
ApoeP08226 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.32■□□□□ 0.52
ApoeP08226 Gm40881-201ENSMUST00000223397 166 ntBASIC18.32■□□□□ 0.52
ApoeP08226 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ApoeP08226 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.32■□□□□ 0.52
ApoeP08226 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ApoeP08226 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ApoeP08226 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.32■□□□□ 0.52
ApoeP08226 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ApoeP08226 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ApoeP08226 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ApoeP08226 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ApoeP08226 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ApoeP08226 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.31■□□□□ 0.52
ApoeP08226 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.31■□□□□ 0.52
ApoeP08226 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.31■□□□□ 0.52
ApoeP08226 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ApoeP08226 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ApoeP08226 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ApoeP08226 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ApoeP08226 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ApoeP08226 AA386476-201ENSMUST00000098781 1665 ntBASIC18.31■□□□□ 0.52
ApoeP08226 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ApoeP08226 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ApoeP08226 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ApoeP08226 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ApoeP08226 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms