Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Mir6982-201ENSMUST00000184354 68 ntBASIC20.63■□□□□ 0.89
P04214 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.63■□□□□ 0.89
P04214 Rab3c-203ENSMUST00000224180 967 ntBASIC20.63■□□□□ 0.89
P04214 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
P04214 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
P04214 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
P04214 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
P04214 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
P04214 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.62■□□□□ 0.89
P04214 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
P04214 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
P04214 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
P04214 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
P04214 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
P04214 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
P04214 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
P04214 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
P04214 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.61■□□□□ 0.89
P04214 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
P04214 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
P04214 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
P04214 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.6■□□□□ 0.89
P04214 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
P04214 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
P04214 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
P04214 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.59■□□□□ 0.89
P04214 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
P04214 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
P04214 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
P04214 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
P04214 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.59■□□□□ 0.89
P04214 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
P04214 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
P04214 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.59■□□□□ 0.89
P04214 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
P04214 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
P04214 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.58■□□□□ 0.89
P04214 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
P04214 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.58■□□□□ 0.89
P04214 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.58■□□□□ 0.89
P04214 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
P04214 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.58■□□□□ 0.88
P04214 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
P04214 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
P04214 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.57■□□□□ 0.88
P04214 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
P04214 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
P04214 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.57■□□□□ 0.88
P04214 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
P04214 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
P04214 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
P04214 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
P04214 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
P04214 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
P04214 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
P04214 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
P04214 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.56■□□□□ 0.88
P04214 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
P04214 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
P04214 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
P04214 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
P04214 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.55■□□□□ 0.88
P04214 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.55■□□□□ 0.88
P04214 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
P04214 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
P04214 Gm7860-201ENSMUST00000121190 879 ntBASIC20.55■□□□□ 0.88
P04214 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
P04214 Gm7977-201ENSMUST00000193787 748 ntBASIC20.55■□□□□ 0.88
P04214 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
P04214 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
P04214 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
P04214 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
P04214 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.55■□□□□ 0.88
P04214 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
P04214 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
P04214 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
P04214 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
P04214 Gm27275-201ENSMUST00000184318 272 ntBASIC20.54■□□□□ 0.88
P04214 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.54■□□□□ 0.88
P04214 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
P04214 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
P04214 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
P04214 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
P04214 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
P04214 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.53■□□□□ 0.88
P04214 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.53■□□□□ 0.88
P04214 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
P04214 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
P04214 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.53■□□□□ 0.88
P04214 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.53■□□□□ 0.88
P04214 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
P04214 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.53■□□□□ 0.88
P04214 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
P04214 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
P04214 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
P04214 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
P04214 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
P04214 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.53■□□□□ 0.88
P04214 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
P04214 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms