Protein–RNA interactions for Protein: P04202

Tgfb1, Transforming growth factor beta-1, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfb1P04202 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Tgfb1P04202 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tgfb1P04202 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
Tgfb1P04202 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tgfb1P04202 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tgfb1P04202 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.99■□□□□ 0.47
Tgfb1P04202 Serp2-204ENSMUST00000228055 705 ntBASIC17.99■□□□□ 0.47
Tgfb1P04202 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
Tgfb1P04202 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tgfb1P04202 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Tgfb1P04202 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tgfb1P04202 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tgfb1P04202 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tgfb1P04202 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tgfb1P04202 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tgfb1P04202 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Tgfb1P04202 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Tgfb1P04202 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
Tgfb1P04202 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tgfb1P04202 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.98■□□□□ 0.47
Tgfb1P04202 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.98■□□□□ 0.47
Tgfb1P04202 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tgfb1P04202 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Tgfb1P04202 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tgfb1P04202 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tgfb1P04202 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Tgfb1P04202 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.98■□□□□ 0.47
Tgfb1P04202 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tgfb1P04202 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Tgfb1P04202 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tgfb1P04202 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tgfb1P04202 Gm12251-201ENSMUST00000117893 792 ntBASIC17.97■□□□□ 0.47
Tgfb1P04202 Gm43137-201ENSMUST00000198052 594 ntBASIC17.97■□□□□ 0.47
Tgfb1P04202 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tgfb1P04202 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tgfb1P04202 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Tgfb1P04202 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tgfb1P04202 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tgfb1P04202 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tgfb1P04202 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tgfb1P04202 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tgfb1P04202 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tgfb1P04202 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Tgfb1P04202 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Tgfb1P04202 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Tgfb1P04202 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tgfb1P04202 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tgfb1P04202 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.96■□□□□ 0.47
Tgfb1P04202 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Tgfb1P04202 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tgfb1P04202 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tgfb1P04202 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
Tgfb1P04202 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Tgfb1P04202 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
Tgfb1P04202 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tgfb1P04202 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Tgfb1P04202 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tgfb1P04202 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tgfb1P04202 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.95■□□□□ 0.46
Tgfb1P04202 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tgfb1P04202 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tgfb1P04202 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tgfb1P04202 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tgfb1P04202 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tgfb1P04202 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tgfb1P04202 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.95■□□□□ 0.46
Tgfb1P04202 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tgfb1P04202 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tgfb1P04202 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Tgfb1P04202 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.94■□□□□ 0.46
Tgfb1P04202 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Tgfb1P04202 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Tgfb1P04202 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.94■□□□□ 0.46
Tgfb1P04202 Spcs1-204ENSMUST00000226782 949 ntBASIC17.94■□□□□ 0.46
Tgfb1P04202 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.94■□□□□ 0.46
Tgfb1P04202 Gm13241-201ENSMUST00000094493 780 ntBASIC17.94■□□□□ 0.46
Tgfb1P04202 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tgfb1P04202 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Tgfb1P04202 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Tgfb1P04202 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Tgfb1P04202 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tgfb1P04202 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tgfb1P04202 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.93■□□□□ 0.46
Tgfb1P04202 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tgfb1P04202 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tgfb1P04202 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tgfb1P04202 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tgfb1P04202 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Tgfb1P04202 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tgfb1P04202 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Tgfb1P04202 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.93■□□□□ 0.46
Tgfb1P04202 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tgfb1P04202 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tgfb1P04202 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tgfb1P04202 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tgfb1P04202 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tgfb1P04202 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tgfb1P04202 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tgfb1P04202 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tgfb1P04202 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms