Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vti1aO89116 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Vti1aO89116 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vti1aO89116 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vti1aO89116 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vti1aO89116 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Vti1aO89116 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
Vti1aO89116 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.98■□□□□ 0.95
Vti1aO89116 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vti1aO89116 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vti1aO89116 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vti1aO89116 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vti1aO89116 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.97■□□□□ 0.95
Vti1aO89116 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.97■□□□□ 0.95
Vti1aO89116 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vti1aO89116 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Vti1aO89116 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vti1aO89116 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vti1aO89116 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Vti1aO89116 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vti1aO89116 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vti1aO89116 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vti1aO89116 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Vti1aO89116 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
Vti1aO89116 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Vti1aO89116 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Vti1aO89116 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vti1aO89116 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Vti1aO89116 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.96■□□□□ 0.95
Vti1aO89116 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vti1aO89116 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.96■□□□□ 0.95
Vti1aO89116 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vti1aO89116 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.95■□□□□ 0.94
Vti1aO89116 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Vti1aO89116 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vti1aO89116 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vti1aO89116 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vti1aO89116 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vti1aO89116 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vti1aO89116 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vti1aO89116 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vti1aO89116 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vti1aO89116 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vti1aO89116 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vti1aO89116 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Vti1aO89116 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.94■□□□□ 0.94
Vti1aO89116 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vti1aO89116 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vti1aO89116 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vti1aO89116 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vti1aO89116 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vti1aO89116 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Vti1aO89116 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vti1aO89116 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Vti1aO89116 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Vti1aO89116 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vti1aO89116 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vti1aO89116 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Vti1aO89116 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vti1aO89116 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
Vti1aO89116 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vti1aO89116 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Vti1aO89116 Notumos-201ENSMUST00000151998 2659 ntBASIC20.92■□□□□ 0.94
Vti1aO89116 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vti1aO89116 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Vti1aO89116 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vti1aO89116 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vti1aO89116 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vti1aO89116 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Vti1aO89116 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vti1aO89116 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vti1aO89116 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.91■□□□□ 0.94
Vti1aO89116 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vti1aO89116 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.91■□□□□ 0.94
Vti1aO89116 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vti1aO89116 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vti1aO89116 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Vti1aO89116 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vti1aO89116 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vti1aO89116 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vti1aO89116 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vti1aO89116 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vti1aO89116 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Vti1aO89116 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vti1aO89116 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Vti1aO89116 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vti1aO89116 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.9■□□□□ 0.94
Vti1aO89116 Gm10602-201ENSMUST00000098239 609 ntBASIC20.9■□□□□ 0.94
Vti1aO89116 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.9■□□□□ 0.94
Vti1aO89116 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vti1aO89116 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Vti1aO89116 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Vti1aO89116 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Vti1aO89116 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vti1aO89116 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vti1aO89116 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vti1aO89116 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.89■□□□□ 0.93
Vti1aO89116 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.89■□□□□ 0.93
Vti1aO89116 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vti1aO89116 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms