Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Best1O88870 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.8■□□□□ 0.6
Best1O88870 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Best1O88870 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Best1O88870 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Best1O88870 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.8■□□□□ 0.6
Best1O88870 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.8■□□□□ 0.6
Best1O88870 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Best1O88870 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Best1O88870 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Best1O88870 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Best1O88870 Gm13146-201ENSMUST00000118508 780 ntBASIC18.79■□□□□ 0.6
Best1O88870 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Best1O88870 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Best1O88870 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Best1O88870 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Best1O88870 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
Best1O88870 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Best1O88870 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Best1O88870 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Best1O88870 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Best1O88870 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Best1O88870 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Best1O88870 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Best1O88870 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.78■□□□□ 0.6
Best1O88870 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.78■□□□□ 0.6
Best1O88870 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Best1O88870 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Best1O88870 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Best1O88870 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.78■□□□□ 0.6
Best1O88870 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Best1O88870 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Best1O88870 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Best1O88870 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Best1O88870 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Best1O88870 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Best1O88870 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Best1O88870 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Best1O88870 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Best1O88870 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Best1O88870 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Best1O88870 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Best1O88870 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.76■□□□□ 0.59
Best1O88870 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.76■□□□□ 0.59
Best1O88870 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.76■□□□□ 0.59
Best1O88870 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.76■□□□□ 0.59
Best1O88870 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.76■□□□□ 0.59
Best1O88870 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Best1O88870 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Best1O88870 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Best1O88870 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Best1O88870 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Best1O88870 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.75■□□□□ 0.59
Best1O88870 Gm37179-201ENSMUST00000194862 823 ntBASIC18.75■□□□□ 0.59
Best1O88870 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.75■□□□□ 0.59
Best1O88870 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Best1O88870 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Best1O88870 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Best1O88870 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Best1O88870 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Best1O88870 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Best1O88870 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Best1O88870 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Best1O88870 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.74■□□□□ 0.59
Best1O88870 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.74■□□□□ 0.59
Best1O88870 Gm38205-201ENSMUST00000192243 258 ntBASIC18.74■□□□□ 0.59
Best1O88870 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.74■□□□□ 0.59
Best1O88870 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Best1O88870 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Best1O88870 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Best1O88870 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Best1O88870 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Best1O88870 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Best1O88870 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Best1O88870 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Best1O88870 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Best1O88870 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Best1O88870 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Best1O88870 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Best1O88870 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.73■□□□□ 0.59
Best1O88870 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Best1O88870 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Best1O88870 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.73■□□□□ 0.59
Best1O88870 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Best1O88870 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Best1O88870 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Best1O88870 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Best1O88870 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Best1O88870 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Best1O88870 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Best1O88870 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Best1O88870 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Best1O88870 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Best1O88870 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Best1O88870 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Best1O88870 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Best1O88870 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Best1O88870 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Best1O88870 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.71■□□□□ 0.59
Best1O88870 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms