Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cops4O88544 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Cops4O88544 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.9■□□□□ 0.46
Cops4O88544 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cops4O88544 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cops4O88544 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cops4O88544 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cops4O88544 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cops4O88544 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cops4O88544 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Cops4O88544 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Cops4O88544 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cops4O88544 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cops4O88544 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cops4O88544 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cops4O88544 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Cops4O88544 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Cops4O88544 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.89■□□□□ 0.45
Cops4O88544 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cops4O88544 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cops4O88544 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cops4O88544 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cops4O88544 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cops4O88544 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cops4O88544 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cops4O88544 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cops4O88544 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Cops4O88544 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cops4O88544 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cops4O88544 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cops4O88544 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cops4O88544 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Cops4O88544 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cops4O88544 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Cops4O88544 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cops4O88544 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cops4O88544 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Cops4O88544 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cops4O88544 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.87■□□□□ 0.45
Cops4O88544 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.87■□□□□ 0.45
Cops4O88544 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.87■□□□□ 0.45
Cops4O88544 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.87■□□□□ 0.45
Cops4O88544 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cops4O88544 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cops4O88544 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cops4O88544 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cops4O88544 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cops4O88544 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cops4O88544 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cops4O88544 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cops4O88544 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cops4O88544 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cops4O88544 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cops4O88544 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.86■□□□□ 0.45
Cops4O88544 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cops4O88544 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cops4O88544 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cops4O88544 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cops4O88544 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cops4O88544 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cops4O88544 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Cops4O88544 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cops4O88544 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cops4O88544 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cops4O88544 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.85■□□□□ 0.45
Cops4O88544 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
Cops4O88544 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cops4O88544 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cops4O88544 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cops4O88544 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cops4O88544 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cops4O88544 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cops4O88544 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cops4O88544 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cops4O88544 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cops4O88544 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cops4O88544 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cops4O88544 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cops4O88544 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cops4O88544 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cops4O88544 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Cops4O88544 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Cops4O88544 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Cops4O88544 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
Cops4O88544 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Cops4O88544 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cops4O88544 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cops4O88544 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Cops4O88544 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.83■□□□□ 0.44
Cops4O88544 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Cops4O88544 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cops4O88544 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cops4O88544 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.83■□□□□ 0.44
Cops4O88544 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cops4O88544 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cops4O88544 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cops4O88544 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cops4O88544 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cops4O88544 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Cops4O88544 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms