Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
Capns1O88456 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Capns1O88456 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Capns1O88456 Gm12821-201ENSMUST00000120022 600 ntBASIC17.88■□□□□ 0.45
Capns1O88456 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Capns1O88456 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Capns1O88456 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Capns1O88456 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Capns1O88456 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Capns1O88456 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Capns1O88456 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Capns1O88456 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Capns1O88456 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Capns1O88456 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Capns1O88456 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Capns1O88456 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Capns1O88456 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Capns1O88456 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.87■□□□□ 0.45
Capns1O88456 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Capns1O88456 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.87■□□□□ 0.45
Capns1O88456 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Capns1O88456 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Capns1O88456 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Capns1O88456 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Capns1O88456 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Capns1O88456 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Capns1O88456 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Capns1O88456 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Capns1O88456 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Capns1O88456 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Capns1O88456 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Capns1O88456 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.86■□□□□ 0.45
Capns1O88456 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Capns1O88456 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.86■□□□□ 0.45
Capns1O88456 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Capns1O88456 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Capns1O88456 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.86■□□□□ 0.45
Capns1O88456 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Capns1O88456 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Capns1O88456 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Capns1O88456 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Capns1O88456 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Capns1O88456 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Capns1O88456 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Capns1O88456 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Capns1O88456 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Capns1O88456 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Capns1O88456 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Capns1O88456 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.85■□□□□ 0.45
Capns1O88456 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Capns1O88456 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Capns1O88456 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Capns1O88456 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Capns1O88456 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Capns1O88456 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.84■□□□□ 0.45
Capns1O88456 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Capns1O88456 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Capns1O88456 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.84■□□□□ 0.45
Capns1O88456 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Capns1O88456 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Capns1O88456 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.84■□□□□ 0.45
Capns1O88456 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Capns1O88456 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Capns1O88456 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Capns1O88456 Gm27454-201ENSMUST00000185090 204 ntBASIC17.84■□□□□ 0.45
Capns1O88456 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Capns1O88456 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Capns1O88456 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Capns1O88456 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Capns1O88456 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Capns1O88456 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Capns1O88456 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Capns1O88456 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Capns1O88456 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Capns1O88456 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Capns1O88456 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Capns1O88456 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Capns1O88456 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Capns1O88456 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Capns1O88456 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Capns1O88456 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Capns1O88456 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Capns1O88456 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Capns1O88456 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.82■□□□□ 0.44
Capns1O88456 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Capns1O88456 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Capns1O88456 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Capns1O88456 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.82■□□□□ 0.44
Capns1O88456 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Capns1O88456 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.82■□□□□ 0.44
Capns1O88456 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Capns1O88456 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Capns1O88456 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Capns1O88456 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Capns1O88456 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Capns1O88456 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Capns1O88456 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Capns1O88456 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Capns1O88456 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Capns1O88456 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms