Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ttc3O88196 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ttc3O88196 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Ttc3O88196 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.6■□□□□ 0.89
Ttc3O88196 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.6■□□□□ 0.89
Ttc3O88196 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.59■□□□□ 0.89
Ttc3O88196 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ttc3O88196 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ttc3O88196 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ttc3O88196 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ttc3O88196 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ttc3O88196 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ttc3O88196 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ttc3O88196 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ttc3O88196 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ttc3O88196 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ttc3O88196 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ttc3O88196 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.58■□□□□ 0.89
Ttc3O88196 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ttc3O88196 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.58■□□□□ 0.89
Ttc3O88196 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ttc3O88196 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ttc3O88196 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ttc3O88196 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Ttc3O88196 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ttc3O88196 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ttc3O88196 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.57■□□□□ 0.88
Ttc3O88196 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ttc3O88196 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ttc3O88196 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ttc3O88196 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.57■□□□□ 0.88
Ttc3O88196 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Ttc3O88196 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ttc3O88196 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ttc3O88196 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.56■□□□□ 0.88
Ttc3O88196 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ttc3O88196 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.56■□□□□ 0.88
Ttc3O88196 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ttc3O88196 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.56■□□□□ 0.88
Ttc3O88196 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Ttc3O88196 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ttc3O88196 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ttc3O88196 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ttc3O88196 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ttc3O88196 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ttc3O88196 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ttc3O88196 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ttc3O88196 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ttc3O88196 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.55■□□□□ 0.88
Ttc3O88196 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ttc3O88196 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.55■□□□□ 0.88
Ttc3O88196 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.55■□□□□ 0.88
Ttc3O88196 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ttc3O88196 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ttc3O88196 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ttc3O88196 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.54■□□□□ 0.88
Ttc3O88196 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ttc3O88196 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ttc3O88196 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ttc3O88196 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ttc3O88196 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Ttc3O88196 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.54■□□□□ 0.88
Ttc3O88196 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
Ttc3O88196 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.54■□□□□ 0.88
Ttc3O88196 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Ttc3O88196 Gm10602-201ENSMUST00000098239 609 ntBASIC20.54■□□□□ 0.88
Ttc3O88196 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ttc3O88196 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ttc3O88196 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ttc3O88196 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ttc3O88196 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ttc3O88196 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.53■□□□□ 0.88
Ttc3O88196 Gm6420-201ENSMUST00000193885 723 ntBASIC20.53■□□□□ 0.88
Ttc3O88196 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Ttc3O88196 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ttc3O88196 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ttc3O88196 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.52■□□□□ 0.88
Ttc3O88196 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ttc3O88196 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.52■□□□□ 0.88
Ttc3O88196 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Ttc3O88196 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ttc3O88196 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ttc3O88196 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Ttc3O88196 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Ttc3O88196 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ttc3O88196 Gm13534-201ENSMUST00000121169 513 ntBASIC20.52■□□□□ 0.87
Ttc3O88196 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ttc3O88196 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ttc3O88196 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Ttc3O88196 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ttc3O88196 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ttc3O88196 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ttc3O88196 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ttc3O88196 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.51■□□□□ 0.87
Ttc3O88196 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.51■□□□□ 0.87
Ttc3O88196 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.51■□□□□ 0.87
Ttc3O88196 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ttc3O88196 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ttc3O88196 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ttc3O88196 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms