Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Ubr1O70481 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Ubr1O70481 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Ubr1O70481 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Ubr1O70481 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Ubr1O70481 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Ubr1O70481 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC25.71■■□□□ 1.71
Ubr1O70481 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Ubr1O70481 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC25.71■■□□□ 1.71
Ubr1O70481 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.71
Ubr1O70481 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
Ubr1O70481 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Ubr1O70481 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.7
Ubr1O70481 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC25.7■■□□□ 1.7
Ubr1O70481 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.7
Ubr1O70481 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC25.7■■□□□ 1.7
Ubr1O70481 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Ubr1O70481 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Ubr1O70481 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Ubr1O70481 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Ubr1O70481 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Ubr1O70481 Gm5408-201ENSMUST00000197998 747 ntBASIC25.69■■□□□ 1.7
Ubr1O70481 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Ubr1O70481 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Ubr1O70481 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Ubr1O70481 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Ubr1O70481 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC25.68■■□□□ 1.7
Ubr1O70481 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Ubr1O70481 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Ubr1O70481 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Ubr1O70481 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC25.68■■□□□ 1.7
Ubr1O70481 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Ubr1O70481 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Ubr1O70481 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Ubr1O70481 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC25.67■■□□□ 1.7
Ubr1O70481 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC25.67■■□□□ 1.7
Ubr1O70481 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
Ubr1O70481 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
Ubr1O70481 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Ubr1O70481 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Ubr1O70481 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Ubr1O70481 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC25.67■■□□□ 1.7
Ubr1O70481 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Ubr1O70481 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Ubr1O70481 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ubr1O70481 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ubr1O70481 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Ubr1O70481 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ubr1O70481 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ubr1O70481 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC25.66■■□□□ 1.7
Ubr1O70481 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC25.66■■□□□ 1.7
Ubr1O70481 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
Ubr1O70481 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ubr1O70481 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ubr1O70481 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC25.65■■□□□ 1.7
Ubr1O70481 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC25.65■■□□□ 1.7
Ubr1O70481 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ubr1O70481 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.7
Ubr1O70481 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
Ubr1O70481 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
Ubr1O70481 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Ubr1O70481 Gm6365-201ENSMUST00000054711 744 ntBASIC25.64■■□□□ 1.7
Ubr1O70481 Gm13042-201ENSMUST00000119244 1955 ntBASIC25.64■■□□□ 1.69
Ubr1O70481 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
Ubr1O70481 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
Ubr1O70481 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Ubr1O70481 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.69
Ubr1O70481 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ubr1O70481 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC25.63■■□□□ 1.69
Ubr1O70481 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ubr1O70481 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC25.62■■□□□ 1.69
Ubr1O70481 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Ubr1O70481 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Ubr1O70481 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC25.61■■□□□ 1.69
Ubr1O70481 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Ubr1O70481 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
Ubr1O70481 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
Ubr1O70481 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
Ubr1O70481 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC25.61■■□□□ 1.69
Ubr1O70481 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Ubr1O70481 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Ubr1O70481 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
Ubr1O70481 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Ubr1O70481 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
Ubr1O70481 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
Ubr1O70481 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Ubr1O70481 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
Ubr1O70481 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC25.58■■□□□ 1.69
Ubr1O70481 Gm27032-201ENSMUST00000183124 1116 ntBASIC25.58■■□□□ 1.69
Ubr1O70481 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC25.58■■□□□ 1.69
Ubr1O70481 Gm20049-201ENSMUST00000219950 730 ntBASIC25.58■■□□□ 1.69
Ubr1O70481 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Ubr1O70481 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
Ubr1O70481 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Ubr1O70481 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC25.58■■□□□ 1.68
Ubr1O70481 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
Ubr1O70481 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Ubr1O70481 Gm20760-201ENSMUST00000179197 648 ntBASIC25.57■■□□□ 1.68
Ubr1O70481 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Ubr1O70481 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms