Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Prom1O54990 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Prom1O54990 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Prom1O54990 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Prom1O54990 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.61■■□□□ 1.05
Prom1O54990 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Prom1O54990 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Prom1O54990 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.6■■□□□ 1.05
Prom1O54990 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.6■■□□□ 1.05
Prom1O54990 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Prom1O54990 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Prom1O54990 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Prom1O54990 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Prom1O54990 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Prom1O54990 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Prom1O54990 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Prom1O54990 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Prom1O54990 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.59■■□□□ 1.05
Prom1O54990 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Prom1O54990 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Prom1O54990 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Prom1O54990 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Prom1O54990 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Prom1O54990 Gm12527-201ENSMUST00000117967 564 ntBASIC21.58■■□□□ 1.05
Prom1O54990 Gm6365-201ENSMUST00000054711 744 ntBASIC21.58■■□□□ 1.05
Prom1O54990 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.58■■□□□ 1.04
Prom1O54990 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Prom1O54990 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Prom1O54990 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Prom1O54990 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Prom1O54990 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC21.57■■□□□ 1.04
Prom1O54990 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.57■■□□□ 1.04
Prom1O54990 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
Prom1O54990 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
Prom1O54990 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Prom1O54990 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Prom1O54990 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Prom1O54990 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Prom1O54990 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Prom1O54990 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Prom1O54990 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Prom1O54990 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Prom1O54990 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
Prom1O54990 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Prom1O54990 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
Prom1O54990 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
Prom1O54990 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Prom1O54990 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Prom1O54990 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.55■■□□□ 1.04
Prom1O54990 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.55■■□□□ 1.04
Prom1O54990 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Prom1O54990 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Prom1O54990 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Prom1O54990 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.54■■□□□ 1.04
Prom1O54990 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Prom1O54990 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Prom1O54990 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
Prom1O54990 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Prom1O54990 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Prom1O54990 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Prom1O54990 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Prom1O54990 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Prom1O54990 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Prom1O54990 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Prom1O54990 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Prom1O54990 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Prom1O54990 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.53■■□□□ 1.04
Prom1O54990 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Prom1O54990 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Prom1O54990 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Prom1O54990 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Prom1O54990 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Prom1O54990 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Prom1O54990 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.52■■□□□ 1.04
Prom1O54990 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Prom1O54990 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Prom1O54990 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Prom1O54990 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Prom1O54990 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21.52■■□□□ 1.04
Prom1O54990 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.52■■□□□ 1.04
Prom1O54990 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Prom1O54990 Gm13534-201ENSMUST00000121169 513 ntBASIC21.52■■□□□ 1.04
Prom1O54990 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Prom1O54990 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Prom1O54990 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Prom1O54990 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Prom1O54990 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Prom1O54990 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC21.51■■□□□ 1.03
Prom1O54990 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Prom1O54990 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Prom1O54990 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC21.51■■□□□ 1.03
Prom1O54990 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Prom1O54990 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Prom1O54990 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Prom1O54990 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Prom1O54990 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Prom1O54990 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Prom1O54990 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Prom1O54990 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC21.5■■□□□ 1.03
Prom1O54990 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms