Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Limk2O54785 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Limk2O54785 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Limk2O54785 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.79■□□□□ 0.76
Limk2O54785 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.79■□□□□ 0.76
Limk2O54785 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
Limk2O54785 Gm42569-201ENSMUST00000200539 472 ntBASIC19.79■□□□□ 0.76
Limk2O54785 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.79■□□□□ 0.76
Limk2O54785 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Limk2O54785 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Limk2O54785 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Limk2O54785 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Limk2O54785 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Limk2O54785 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Limk2O54785 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Limk2O54785 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Limk2O54785 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.78■□□□□ 0.76
Limk2O54785 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Limk2O54785 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Limk2O54785 Gm27405-201ENSMUST00000184201 112 ntBASIC19.78■□□□□ 0.76
Limk2O54785 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Limk2O54785 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Limk2O54785 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
Limk2O54785 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Limk2O54785 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Limk2O54785 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Limk2O54785 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Limk2O54785 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.77■□□□□ 0.76
Limk2O54785 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.77■□□□□ 0.76
Limk2O54785 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.77■□□□□ 0.76
Limk2O54785 Gm26571-201ENSMUST00000181399 666 ntBASIC19.77■□□□□ 0.76
Limk2O54785 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Limk2O54785 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Limk2O54785 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.75
Limk2O54785 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Limk2O54785 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Limk2O54785 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Limk2O54785 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Limk2O54785 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.76■□□□□ 0.75
Limk2O54785 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Limk2O54785 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.76■□□□□ 0.75
Limk2O54785 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.76■□□□□ 0.75
Limk2O54785 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.76■□□□□ 0.75
Limk2O54785 Gm42642-201ENSMUST00000200683 355 ntBASIC19.76■□□□□ 0.75
Limk2O54785 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Limk2O54785 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
Limk2O54785 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.76■□□□□ 0.75
Limk2O54785 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Limk2O54785 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Limk2O54785 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Limk2O54785 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Limk2O54785 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Limk2O54785 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.75■□□□□ 0.75
Limk2O54785 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.75■□□□□ 0.75
Limk2O54785 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Limk2O54785 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Limk2O54785 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Limk2O54785 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Limk2O54785 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Limk2O54785 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Limk2O54785 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Limk2O54785 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
Limk2O54785 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Limk2O54785 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.74■□□□□ 0.75
Limk2O54785 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Limk2O54785 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Limk2O54785 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.74■□□□□ 0.75
Limk2O54785 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Limk2O54785 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Limk2O54785 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Limk2O54785 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Limk2O54785 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Limk2O54785 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Limk2O54785 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Limk2O54785 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Limk2O54785 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Limk2O54785 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Limk2O54785 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Limk2O54785 Smad6-203ENSMUST00000179458 273 ntBASIC19.73■□□□□ 0.75
Limk2O54785 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.73■□□□□ 0.75
Limk2O54785 Gm40848-201ENSMUST00000221998 324 ntBASIC19.73■□□□□ 0.75
Limk2O54785 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Limk2O54785 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Limk2O54785 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Limk2O54785 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Limk2O54785 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Limk2O54785 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Limk2O54785 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Limk2O54785 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Limk2O54785 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.72■□□□□ 0.75
Limk2O54785 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.72■□□□□ 0.75
Limk2O54785 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Limk2O54785 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Limk2O54785 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Limk2O54785 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Limk2O54785 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
Limk2O54785 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.71■□□□□ 0.75
Limk2O54785 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Limk2O54785 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Limk2O54785 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms