Protein–RNA interactions for Protein: O35906

Spib, Transcription factor Spi-B, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpibO35906 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC21.68■■□□□ 1.06
SpibO35906 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC21.68■■□□□ 1.06
SpibO35906 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SpibO35906 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SpibO35906 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SpibO35906 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC21.68■■□□□ 1.06
SpibO35906 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.68■■□□□ 1.06
SpibO35906 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SpibO35906 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SpibO35906 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SpibO35906 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC21.67■■□□□ 1.06
SpibO35906 Gm10655-201ENSMUST00000098658 1397 ntBASIC21.67■■□□□ 1.06
SpibO35906 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.67■■□□□ 1.06
SpibO35906 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SpibO35906 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SpibO35906 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SpibO35906 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC21.66■■□□□ 1.06
SpibO35906 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.66■■□□□ 1.06
SpibO35906 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SpibO35906 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
SpibO35906 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SpibO35906 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SpibO35906 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
SpibO35906 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SpibO35906 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21.66■■□□□ 1.06
SpibO35906 Nespas-201ENSMUST00000143738 1083 ntBASIC21.65■■□□□ 1.06
SpibO35906 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SpibO35906 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.65■■□□□ 1.06
SpibO35906 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
SpibO35906 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
SpibO35906 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SpibO35906 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SpibO35906 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
SpibO35906 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.64■■□□□ 1.05
SpibO35906 Gm10653-202ENSMUST00000139570 835 ntBASIC21.64■■□□□ 1.05
SpibO35906 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SpibO35906 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SpibO35906 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SpibO35906 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
SpibO35906 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC21.63■■□□□ 1.05
SpibO35906 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
SpibO35906 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SpibO35906 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.63■■□□□ 1.05
SpibO35906 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
SpibO35906 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SpibO35906 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SpibO35906 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SpibO35906 Gm6365-201ENSMUST00000054711 744 ntBASIC21.63■■□□□ 1.05
SpibO35906 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SpibO35906 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SpibO35906 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SpibO35906 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SpibO35906 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
SpibO35906 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SpibO35906 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SpibO35906 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SpibO35906 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
SpibO35906 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SpibO35906 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
SpibO35906 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SpibO35906 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
SpibO35906 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SpibO35906 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SpibO35906 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SpibO35906 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
SpibO35906 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.61■■□□□ 1.05
SpibO35906 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
SpibO35906 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.61■■□□□ 1.05
SpibO35906 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SpibO35906 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
SpibO35906 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
SpibO35906 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
SpibO35906 Gm12527-201ENSMUST00000117967 564 ntBASIC21.6■■□□□ 1.05
SpibO35906 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC21.6■■□□□ 1.05
SpibO35906 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
SpibO35906 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SpibO35906 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SpibO35906 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SpibO35906 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC21.6■■□□□ 1.05
SpibO35906 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SpibO35906 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
SpibO35906 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SpibO35906 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SpibO35906 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SpibO35906 Gm7290-201ENSMUST00000104990 617 ntBASIC21.59■■□□□ 1.05
SpibO35906 Gm12918-201ENSMUST00000120234 636 ntBASIC21.59■■□□□ 1.05
SpibO35906 Gm7860-201ENSMUST00000121190 879 ntBASIC21.59■■□□□ 1.05
SpibO35906 Gm15710-201ENSMUST00000121821 636 ntBASIC21.59■■□□□ 1.05
SpibO35906 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC21.59■■□□□ 1.05
SpibO35906 Gm5075-201ENSMUST00000196916 622 ntBASIC21.59■■□□□ 1.05
SpibO35906 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SpibO35906 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.59■■□□□ 1.05
SpibO35906 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.59■■□□□ 1.05
SpibO35906 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SpibO35906 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SpibO35906 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SpibO35906 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
SpibO35906 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
SpibO35906 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SpibO35906 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.58■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms