Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 CT010467.1-202ENSMUST00000205406 714 ntBASIC21.34■■□□□ 1.01
Sptlc1O35704 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC21.34■■□□□ 1.01
Sptlc1O35704 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC21.34■■□□□ 1.01
Sptlc1O35704 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Sptlc1O35704 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sptlc1O35704 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sptlc1O35704 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sptlc1O35704 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Sptlc1O35704 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sptlc1O35704 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
Sptlc1O35704 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Sptlc1O35704 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC21.33■■□□□ 1.01
Sptlc1O35704 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.33■■□□□ 1.01
Sptlc1O35704 Gm42790-201ENSMUST00000201268 969 ntBASIC21.33■■□□□ 1.01
Sptlc1O35704 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Sptlc1O35704 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sptlc1O35704 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Sptlc1O35704 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Sptlc1O35704 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Sptlc1O35704 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Sptlc1O35704 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.33■■□□□ 1
Sptlc1O35704 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Sptlc1O35704 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sptlc1O35704 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Sptlc1O35704 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Sptlc1O35704 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Sptlc1O35704 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC21.32■■□□□ 1
Sptlc1O35704 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sptlc1O35704 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.32■■□□□ 1
Sptlc1O35704 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sptlc1O35704 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sptlc1O35704 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.32■■□□□ 1
Sptlc1O35704 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Sptlc1O35704 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
Sptlc1O35704 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC21.31■■□□□ 1
Sptlc1O35704 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sptlc1O35704 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Sptlc1O35704 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sptlc1O35704 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.3■■□□□ 1
Sptlc1O35704 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Sptlc1O35704 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC21.3■■□□□ 1
Sptlc1O35704 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Sptlc1O35704 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Sptlc1O35704 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.3■■□□□ 1
Sptlc1O35704 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.3■■□□□ 1
Sptlc1O35704 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Sptlc1O35704 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Sptlc1O35704 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sptlc1O35704 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Sptlc1O35704 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
Sptlc1O35704 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC21.29■■□□□ 1
Sptlc1O35704 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sptlc1O35704 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.28■■□□□ 1
Sptlc1O35704 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sptlc1O35704 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sptlc1O35704 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.28■■□□□ 1
Sptlc1O35704 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.28■■□□□ 1
Sptlc1O35704 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Sptlc1O35704 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Sptlc1O35704 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sptlc1O35704 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Sptlc1O35704 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.27■■□□□ 1
Sptlc1O35704 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
Sptlc1O35704 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Sptlc1O35704 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.27■■□□□ 1
Sptlc1O35704 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Sptlc1O35704 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Sptlc1O35704 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.27■□□□□ 0.99
Sptlc1O35704 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sptlc1O35704 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Sptlc1O35704 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sptlc1O35704 Mir5133-201ENSMUST00000174955 77 ntBASIC21.26■□□□□ 0.99
Sptlc1O35704 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC21.26■□□□□ 0.99
Sptlc1O35704 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC21.26■□□□□ 0.99
Sptlc1O35704 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.26■□□□□ 0.99
Sptlc1O35704 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sptlc1O35704 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sptlc1O35704 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sptlc1O35704 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.25■□□□□ 0.99
Sptlc1O35704 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Sptlc1O35704 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sptlc1O35704 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC21.25■□□□□ 0.99
Sptlc1O35704 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.24■□□□□ 0.99
Sptlc1O35704 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Sptlc1O35704 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sptlc1O35704 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Sptlc1O35704 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sptlc1O35704 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sptlc1O35704 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sptlc1O35704 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sptlc1O35704 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC21.24■□□□□ 0.99
Sptlc1O35704 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC21.24■□□□□ 0.99
Sptlc1O35704 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Sptlc1O35704 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sptlc1O35704 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sptlc1O35704 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sptlc1O35704 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sptlc1O35704 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.24■□□□□ 0.99
Sptlc1O35704 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sptlc1O35704 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms