Protein–RNA interactions for Protein: O35655

Ppef1, Serine/threonine-protein phosphatase with EF-hands 1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppef1O35655 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ppef1O35655 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Ppef1O35655 Gm17971-201ENSMUST00000190239 806 ntBASIC23.31■■□□□ 1.32
Ppef1O35655 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Ppef1O35655 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Ppef1O35655 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ppef1O35655 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ppef1O35655 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ppef1O35655 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ppef1O35655 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ppef1O35655 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ppef1O35655 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ppef1O35655 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ppef1O35655 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ppef1O35655 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ppef1O35655 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC23.29■■□□□ 1.32
Ppef1O35655 Gm14859-201ENSMUST00000117752 357 ntBASIC23.29■■□□□ 1.32
Ppef1O35655 Gm13559-201ENSMUST00000120476 863 ntBASIC23.29■■□□□ 1.32
Ppef1O35655 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Ppef1O35655 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ppef1O35655 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ppef1O35655 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ppef1O35655 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ppef1O35655 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ppef1O35655 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Ppef1O35655 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Ppef1O35655 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC23.28■■□□□ 1.32
Ppef1O35655 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC23.28■■□□□ 1.32
Ppef1O35655 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ppef1O35655 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ppef1O35655 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ppef1O35655 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC23.27■■□□□ 1.32
Ppef1O35655 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC23.27■■□□□ 1.32
Ppef1O35655 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ppef1O35655 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC23.26■■□□□ 1.31
Ppef1O35655 AA414768-201ENSMUST00000121924 1257 ntBASIC23.26■■□□□ 1.31
Ppef1O35655 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Ppef1O35655 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Ppef1O35655 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ppef1O35655 AC131586.2-201ENSMUST00000228370 1512 ntBASIC23.25■■□□□ 1.31
Ppef1O35655 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Ppef1O35655 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ppef1O35655 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC23.25■■□□□ 1.31
Ppef1O35655 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ppef1O35655 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ppef1O35655 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Ppef1O35655 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ppef1O35655 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Ppef1O35655 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ppef1O35655 Gm13158-201ENSMUST00000122007 736 ntBASIC23.24■■□□□ 1.31
Ppef1O35655 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC23.24■■□□□ 1.31
Ppef1O35655 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ppef1O35655 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Ppef1O35655 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ppef1O35655 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Ppef1O35655 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ppef1O35655 Gm10013-201ENSMUST00000106074 672 ntBASIC23.23■■□□□ 1.31
Ppef1O35655 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
Ppef1O35655 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Ppef1O35655 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ppef1O35655 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Ppef1O35655 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Ppef1O35655 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ppef1O35655 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC23.21■■□□□ 1.31
Ppef1O35655 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Ppef1O35655 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ppef1O35655 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ppef1O35655 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Ppef1O35655 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Ppef1O35655 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Ppef1O35655 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ppef1O35655 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ppef1O35655 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ppef1O35655 Gm7889-201ENSMUST00000185591 958 ntBASIC23.2■■□□□ 1.3
Ppef1O35655 Gm21814-202ENSMUST00000203277 873 ntBASIC23.2■■□□□ 1.3
Ppef1O35655 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC23.2■■□□□ 1.3
Ppef1O35655 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ppef1O35655 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Ppef1O35655 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Ppef1O35655 Gm2399-201ENSMUST00000104944 225 ntBASIC23.19■■□□□ 1.3
Ppef1O35655 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ppef1O35655 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC23.19■■□□□ 1.3
Ppef1O35655 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ppef1O35655 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Ppef1O35655 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ppef1O35655 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Ppef1O35655 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ppef1O35655 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ppef1O35655 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ppef1O35655 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ppef1O35655 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ppef1O35655 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ppef1O35655 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC23.18■■□□□ 1.3
Ppef1O35655 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC23.18■■□□□ 1.3
Ppef1O35655 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ppef1O35655 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ppef1O35655 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC23.17■■□□□ 1.3
Ppef1O35655 Gm11539-201ENSMUST00000119837 557 ntBASIC23.17■■□□□ 1.3
Ppef1O35655 Gm13436-201ENSMUST00000120418 567 ntBASIC23.17■■□□□ 1.3
Ppef1O35655 Gm43514-201ENSMUST00000198852 424 ntBASIC23.17■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms