Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atf6bO35451 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atf6bO35451 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atf6bO35451 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atf6bO35451 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atf6bO35451 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.81■□□□□ 0.28
Atf6bO35451 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atf6bO35451 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.81■□□□□ 0.28
Atf6bO35451 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.81■□□□□ 0.28
Atf6bO35451 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Atf6bO35451 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Atf6bO35451 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atf6bO35451 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Atf6bO35451 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Atf6bO35451 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Atf6bO35451 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atf6bO35451 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.8■□□□□ 0.28
Atf6bO35451 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.8■□□□□ 0.28
Atf6bO35451 Gm43173-201ENSMUST00000202246 593 ntBASIC16.8■□□□□ 0.28
Atf6bO35451 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atf6bO35451 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Atf6bO35451 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Atf6bO35451 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atf6bO35451 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Atf6bO35451 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Atf6bO35451 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atf6bO35451 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atf6bO35451 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Atf6bO35451 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.79■□□□□ 0.28
Atf6bO35451 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.79■□□□□ 0.28
Atf6bO35451 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atf6bO35451 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atf6bO35451 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Atf6bO35451 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atf6bO35451 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Atf6bO35451 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atf6bO35451 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atf6bO35451 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atf6bO35451 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atf6bO35451 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atf6bO35451 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atf6bO35451 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.78■□□□□ 0.28
Atf6bO35451 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Atf6bO35451 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atf6bO35451 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Atf6bO35451 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atf6bO35451 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Atf6bO35451 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Atf6bO35451 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Atf6bO35451 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.77■□□□□ 0.28
Atf6bO35451 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Atf6bO35451 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Atf6bO35451 Flvcr1-202ENSMUST00000191946 1216 ntBASIC16.77■□□□□ 0.28
Atf6bO35451 Gm43017-201ENSMUST00000198296 752 ntBASIC16.77■□□□□ 0.28
Atf6bO35451 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Atf6bO35451 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Atf6bO35451 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Atf6bO35451 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Atf6bO35451 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.77■□□□□ 0.27
Atf6bO35451 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Atf6bO35451 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atf6bO35451 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Atf6bO35451 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atf6bO35451 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Atf6bO35451 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.76■□□□□ 0.27
Atf6bO35451 Serp2-204ENSMUST00000228055 705 ntBASIC16.76■□□□□ 0.27
Atf6bO35451 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atf6bO35451 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atf6bO35451 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Atf6bO35451 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
Atf6bO35451 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atf6bO35451 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atf6bO35451 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atf6bO35451 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atf6bO35451 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Atf6bO35451 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Atf6bO35451 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Atf6bO35451 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atf6bO35451 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atf6bO35451 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.75■□□□□ 0.27
Atf6bO35451 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atf6bO35451 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Atf6bO35451 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atf6bO35451 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atf6bO35451 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atf6bO35451 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Atf6bO35451 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Atf6bO35451 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atf6bO35451 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.75■□□□□ 0.27
Atf6bO35451 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atf6bO35451 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.74■□□□□ 0.27
Atf6bO35451 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf6bO35451 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.74■□□□□ 0.27
Atf6bO35451 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Atf6bO35451 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf6bO35451 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.74■□□□□ 0.27
Atf6bO35451 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf6bO35451 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf6bO35451 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf6bO35451 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms