Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Col15a1O35206 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC25.3■■□□□ 1.64
Col15a1O35206 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC25.3■■□□□ 1.64
Col15a1O35206 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC25.3■■□□□ 1.64
Col15a1O35206 AC122769.4-201ENSMUST00000228166 901 ntBASIC25.3■■□□□ 1.64
Col15a1O35206 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Col15a1O35206 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Col15a1O35206 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC25.29■■□□□ 1.64
Col15a1O35206 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Col15a1O35206 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Col15a1O35206 Gm37035-201ENSMUST00000194809 2148 ntBASIC25.29■■□□□ 1.64
Col15a1O35206 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Col15a1O35206 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Col15a1O35206 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC25.28■■□□□ 1.64
Col15a1O35206 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Col15a1O35206 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Col15a1O35206 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Col15a1O35206 Gm37856-201ENSMUST00000191634 999 ntBASIC25.28■■□□□ 1.64
Col15a1O35206 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Col15a1O35206 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
Col15a1O35206 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC25.27■■□□□ 1.64
Col15a1O35206 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC25.27■■□□□ 1.64
Col15a1O35206 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Col15a1O35206 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Col15a1O35206 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Col15a1O35206 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Col15a1O35206 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Col15a1O35206 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Col15a1O35206 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Col15a1O35206 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Col15a1O35206 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Col15a1O35206 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Col15a1O35206 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Col15a1O35206 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
Col15a1O35206 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Col15a1O35206 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
Col15a1O35206 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Col15a1O35206 Gm26524-201ENSMUST00000192339 390 ntBASIC25.25■■□□□ 1.63
Col15a1O35206 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Col15a1O35206 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC25.25■■□□□ 1.63
Col15a1O35206 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Col15a1O35206 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Col15a1O35206 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Col15a1O35206 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Col15a1O35206 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Col15a1O35206 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC25.23■■□□□ 1.63
Col15a1O35206 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Col15a1O35206 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Col15a1O35206 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC25.23■■□□□ 1.63
Col15a1O35206 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Col15a1O35206 Gm13168-201ENSMUST00000121771 632 ntBASIC25.23■■□□□ 1.63
Col15a1O35206 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Col15a1O35206 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC25.23■■□□□ 1.63
Col15a1O35206 AC135637.1-201ENSMUST00000227750 365 ntBASIC25.23■■□□□ 1.63
Col15a1O35206 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Col15a1O35206 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Col15a1O35206 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Col15a1O35206 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Col15a1O35206 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
Col15a1O35206 Gm7860-201ENSMUST00000121190 879 ntBASIC25.22■■□□□ 1.63
Col15a1O35206 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Col15a1O35206 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC25.22■■□□□ 1.63
Col15a1O35206 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC25.22■■□□□ 1.63
Col15a1O35206 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Col15a1O35206 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Col15a1O35206 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Col15a1O35206 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Col15a1O35206 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC25.21■■□□□ 1.63
Col15a1O35206 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC25.21■■□□□ 1.63
Col15a1O35206 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Col15a1O35206 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Col15a1O35206 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Col15a1O35206 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Col15a1O35206 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
Col15a1O35206 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC25.21■■□□□ 1.63
Col15a1O35206 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
Col15a1O35206 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC25.21■■□□□ 1.63
Col15a1O35206 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Col15a1O35206 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Col15a1O35206 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Col15a1O35206 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Col15a1O35206 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC25.2■■□□□ 1.63
Col15a1O35206 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC25.2■■□□□ 1.63
Col15a1O35206 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
Col15a1O35206 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Col15a1O35206 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Col15a1O35206 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Col15a1O35206 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Col15a1O35206 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Col15a1O35206 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Col15a1O35206 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Col15a1O35206 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC25.19■■□□□ 1.62
Col15a1O35206 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Col15a1O35206 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
Col15a1O35206 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Col15a1O35206 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Col15a1O35206 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
Col15a1O35206 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
Col15a1O35206 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Col15a1O35206 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms