Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ercc2O08811 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ercc2O08811 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ercc2O08811 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.95■□□□□ 0.78
Ercc2O08811 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ercc2O08811 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ercc2O08811 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
Ercc2O08811 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ercc2O08811 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ercc2O08811 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ercc2O08811 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ercc2O08811 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ercc2O08811 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Ercc2O08811 Gm43017-201ENSMUST00000198296 752 ntBASIC19.94■□□□□ 0.78
Ercc2O08811 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ercc2O08811 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Ercc2O08811 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.94■□□□□ 0.78
Ercc2O08811 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ercc2O08811 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ercc2O08811 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ercc2O08811 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
Ercc2O08811 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ercc2O08811 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ercc2O08811 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ercc2O08811 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.93■□□□□ 0.78
Ercc2O08811 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ercc2O08811 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ercc2O08811 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.93■□□□□ 0.78
Ercc2O08811 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Ercc2O08811 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ercc2O08811 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ercc2O08811 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ercc2O08811 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ercc2O08811 Golph3-202ENSMUST00000226517 2359 ntBASIC19.92■□□□□ 0.78
Ercc2O08811 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Ercc2O08811 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ercc2O08811 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.92■□□□□ 0.78
Ercc2O08811 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Ercc2O08811 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ercc2O08811 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ercc2O08811 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ercc2O08811 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ercc2O08811 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ercc2O08811 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ercc2O08811 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Ercc2O08811 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.91■□□□□ 0.78
Ercc2O08811 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ercc2O08811 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ercc2O08811 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ercc2O08811 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ercc2O08811 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ercc2O08811 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ercc2O08811 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ercc2O08811 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ercc2O08811 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ercc2O08811 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ercc2O08811 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ercc2O08811 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ercc2O08811 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ercc2O08811 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.9■□□□□ 0.78
Ercc2O08811 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ercc2O08811 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
Ercc2O08811 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ercc2O08811 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Ercc2O08811 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ercc2O08811 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ercc2O08811 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ercc2O08811 Gm11421-201ENSMUST00000122124 294 ntBASIC19.88■□□□□ 0.77
Ercc2O08811 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.88■□□□□ 0.77
Ercc2O08811 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ercc2O08811 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ercc2O08811 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Ercc2O08811 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ercc2O08811 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ercc2O08811 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ercc2O08811 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ercc2O08811 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ercc2O08811 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
Ercc2O08811 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.87■□□□□ 0.77
Ercc2O08811 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ercc2O08811 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ercc2O08811 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ercc2O08811 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.87■□□□□ 0.77
Ercc2O08811 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ercc2O08811 Gm26833-201ENSMUST00000180899 440 ntBASIC19.87■□□□□ 0.77
Ercc2O08811 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Ercc2O08811 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.87■□□□□ 0.77
Ercc2O08811 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.87■□□□□ 0.77
Ercc2O08811 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Ercc2O08811 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ercc2O08811 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ercc2O08811 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ercc2O08811 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ercc2O08811 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
Ercc2O08811 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ercc2O08811 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.86■□□□□ 0.77
Ercc2O08811 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ercc2O08811 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.86■□□□□ 0.77
Ercc2O08811 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ercc2O08811 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms