Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ebf3O08791 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ebf3O08791 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ebf3O08791 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Ebf3O08791 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ebf3O08791 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ebf3O08791 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.17■□□□□ 0.82
Ebf3O08791 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.17■□□□□ 0.82
Ebf3O08791 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.17■□□□□ 0.82
Ebf3O08791 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Ebf3O08791 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ebf3O08791 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ebf3O08791 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ebf3O08791 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.17■□□□□ 0.82
Ebf3O08791 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ebf3O08791 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ebf3O08791 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ebf3O08791 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Ebf3O08791 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.16■□□□□ 0.82
Ebf3O08791 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ebf3O08791 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ebf3O08791 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.16■□□□□ 0.82
Ebf3O08791 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
Ebf3O08791 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
Ebf3O08791 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ebf3O08791 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ebf3O08791 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ebf3O08791 Reep4-203ENSMUST00000226563 1444 ntBASIC20.16■□□□□ 0.82
Ebf3O08791 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ebf3O08791 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ebf3O08791 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Ebf3O08791 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ebf3O08791 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ebf3O08791 Gm13234-201ENSMUST00000120010 747 ntBASIC20.15■□□□□ 0.82
Ebf3O08791 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.15■□□□□ 0.82
Ebf3O08791 Gm10602-201ENSMUST00000098239 609 ntBASIC20.15■□□□□ 0.82
Ebf3O08791 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.15■□□□□ 0.82
Ebf3O08791 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ebf3O08791 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ebf3O08791 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ebf3O08791 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ebf3O08791 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ebf3O08791 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ebf3O08791 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Ebf3O08791 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ebf3O08791 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.14■□□□□ 0.81
Ebf3O08791 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.14■□□□□ 0.81
Ebf3O08791 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ebf3O08791 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ebf3O08791 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ebf3O08791 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ebf3O08791 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ebf3O08791 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ebf3O08791 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ebf3O08791 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ebf3O08791 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ebf3O08791 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Ebf3O08791 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Ebf3O08791 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ebf3O08791 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ebf3O08791 Gm27801-201ENSMUST00000184174 223 ntBASIC20.13■□□□□ 0.81
Ebf3O08791 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ebf3O08791 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.13■□□□□ 0.81
Ebf3O08791 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ebf3O08791 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ebf3O08791 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ebf3O08791 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ebf3O08791 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ebf3O08791 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ebf3O08791 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.12■□□□□ 0.81
Ebf3O08791 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Ebf3O08791 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ebf3O08791 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.12■□□□□ 0.81
Ebf3O08791 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ebf3O08791 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
Ebf3O08791 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ebf3O08791 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ebf3O08791 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Ebf3O08791 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ebf3O08791 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.11■□□□□ 0.81
Ebf3O08791 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ebf3O08791 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Ebf3O08791 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ebf3O08791 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ebf3O08791 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ebf3O08791 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.1■□□□□ 0.81
Ebf3O08791 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ebf3O08791 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.1■□□□□ 0.81
Ebf3O08791 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ebf3O08791 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ebf3O08791 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ebf3O08791 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.09■□□□□ 0.81
Ebf3O08791 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ebf3O08791 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ebf3O08791 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ebf3O08791 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Ebf3O08791 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ebf3O08791 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.09■□□□□ 0.81
Ebf3O08791 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ebf3O08791 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms