Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
B020004C17RikJ3QP07 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.99■■□□□ 1.11
B020004C17RikJ3QP07 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
B020004C17RikJ3QP07 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
B020004C17RikJ3QP07 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
B020004C17RikJ3QP07 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
B020004C17RikJ3QP07 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
B020004C17RikJ3QP07 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
B020004C17RikJ3QP07 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
B020004C17RikJ3QP07 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
B020004C17RikJ3QP07 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC21.98■■□□□ 1.11
B020004C17RikJ3QP07 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC21.98■■□□□ 1.11
B020004C17RikJ3QP07 Gm26524-201ENSMUST00000192339 390 ntBASIC21.98■■□□□ 1.11
B020004C17RikJ3QP07 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC21.98■■□□□ 1.11
B020004C17RikJ3QP07 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
B020004C17RikJ3QP07 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
B020004C17RikJ3QP07 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
B020004C17RikJ3QP07 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
B020004C17RikJ3QP07 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC21.97■■□□□ 1.11
B020004C17RikJ3QP07 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
B020004C17RikJ3QP07 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC21.97■■□□□ 1.11
B020004C17RikJ3QP07 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
B020004C17RikJ3QP07 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.97■■□□□ 1.11
B020004C17RikJ3QP07 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
B020004C17RikJ3QP07 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
B020004C17RikJ3QP07 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
B020004C17RikJ3QP07 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
B020004C17RikJ3QP07 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
B020004C17RikJ3QP07 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
B020004C17RikJ3QP07 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
B020004C17RikJ3QP07 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC21.96■■□□□ 1.11
B020004C17RikJ3QP07 Gm7860-201ENSMUST00000121190 879 ntBASIC21.96■■□□□ 1.11
B020004C17RikJ3QP07 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
B020004C17RikJ3QP07 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
B020004C17RikJ3QP07 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.95■■□□□ 1.1
B020004C17RikJ3QP07 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
B020004C17RikJ3QP07 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC21.95■■□□□ 1.1
B020004C17RikJ3QP07 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
B020004C17RikJ3QP07 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC21.95■■□□□ 1.1
B020004C17RikJ3QP07 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
B020004C17RikJ3QP07 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
B020004C17RikJ3QP07 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
B020004C17RikJ3QP07 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
B020004C17RikJ3QP07 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
B020004C17RikJ3QP07 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
B020004C17RikJ3QP07 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
B020004C17RikJ3QP07 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
B020004C17RikJ3QP07 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC21.94■■□□□ 1.1
B020004C17RikJ3QP07 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
B020004C17RikJ3QP07 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
B020004C17RikJ3QP07 Rab3c-203ENSMUST00000224180 967 ntBASIC21.94■■□□□ 1.1
B020004C17RikJ3QP07 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.94■■□□□ 1.1
B020004C17RikJ3QP07 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
B020004C17RikJ3QP07 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
B020004C17RikJ3QP07 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
B020004C17RikJ3QP07 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
B020004C17RikJ3QP07 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
B020004C17RikJ3QP07 Trmt13-210ENSMUST00000198454 880 ntBASIC21.93■■□□□ 1.1
B020004C17RikJ3QP07 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC21.93■■□□□ 1.1
B020004C17RikJ3QP07 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
B020004C17RikJ3QP07 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
B020004C17RikJ3QP07 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
B020004C17RikJ3QP07 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
B020004C17RikJ3QP07 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
B020004C17RikJ3QP07 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.93■■□□□ 1.1
B020004C17RikJ3QP07 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
B020004C17RikJ3QP07 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
B020004C17RikJ3QP07 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
B020004C17RikJ3QP07 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
B020004C17RikJ3QP07 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
B020004C17RikJ3QP07 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
B020004C17RikJ3QP07 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
B020004C17RikJ3QP07 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
B020004C17RikJ3QP07 Gm44878-201ENSMUST00000205812 1295 ntBASIC21.92■■□□□ 1.1
B020004C17RikJ3QP07 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
B020004C17RikJ3QP07 Gm10812-201ENSMUST00000099864 546 ntBASIC21.92■■□□□ 1.1
B020004C17RikJ3QP07 AC131586.2-201ENSMUST00000228370 1512 ntBASIC21.91■■□□□ 1.1
B020004C17RikJ3QP07 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.91■■□□□ 1.1
B020004C17RikJ3QP07 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
B020004C17RikJ3QP07 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
B020004C17RikJ3QP07 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.91■■□□□ 1.1
B020004C17RikJ3QP07 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.91■■□□□ 1.1
B020004C17RikJ3QP07 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
B020004C17RikJ3QP07 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
B020004C17RikJ3QP07 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
B020004C17RikJ3QP07 Gm27032-201ENSMUST00000183124 1116 ntBASIC21.9■■□□□ 1.1
B020004C17RikJ3QP07 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
B020004C17RikJ3QP07 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC21.89■■□□□ 1.1
B020004C17RikJ3QP07 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
B020004C17RikJ3QP07 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
B020004C17RikJ3QP07 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.89■■□□□ 1.09
B020004C17RikJ3QP07 Gm44672-201ENSMUST00000206944 1098 ntBASIC21.89■■□□□ 1.09
B020004C17RikJ3QP07 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
B020004C17RikJ3QP07 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC21.89■■□□□ 1.09
B020004C17RikJ3QP07 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
B020004C17RikJ3QP07 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
B020004C17RikJ3QP07 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
B020004C17RikJ3QP07 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
B020004C17RikJ3QP07 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.88■■□□□ 1.09
B020004C17RikJ3QP07 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms