Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm3139J3QK78 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm3139J3QK78 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.45■□□□□ 0.7
Gm3139J3QK78 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Gm3139J3QK78 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Gm3139J3QK78 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm3139J3QK78 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Gm3139J3QK78 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.45■□□□□ 0.7
Gm3139J3QK78 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.45■□□□□ 0.7
Gm3139J3QK78 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm3139J3QK78 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm3139J3QK78 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm3139J3QK78 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.44■□□□□ 0.7
Gm3139J3QK78 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Gm3139J3QK78 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3139J3QK78 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3139J3QK78 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.44■□□□□ 0.7
Gm3139J3QK78 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3139J3QK78 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Gm3139J3QK78 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.44■□□□□ 0.7
Gm3139J3QK78 Gm9988-201ENSMUST00000069786 435 ntBASIC19.44■□□□□ 0.7
Gm3139J3QK78 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3139J3QK78 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3139J3QK78 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3139J3QK78 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3139J3QK78 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3139J3QK78 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3139J3QK78 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.44■□□□□ 0.7
Gm3139J3QK78 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3139J3QK78 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3139J3QK78 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3139J3QK78 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3139J3QK78 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3139J3QK78 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3139J3QK78 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3139J3QK78 Gm42778-201ENSMUST00000199644 553 ntBASIC19.43■□□□□ 0.7
Gm3139J3QK78 Gm42642-201ENSMUST00000200683 355 ntBASIC19.43■□□□□ 0.7
Gm3139J3QK78 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3139J3QK78 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3139J3QK78 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3139J3QK78 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3139J3QK78 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm3139J3QK78 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm3139J3QK78 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm3139J3QK78 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Gm3139J3QK78 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm3139J3QK78 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Gm3139J3QK78 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3139J3QK78 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Gm3139J3QK78 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.41■□□□□ 0.7
Gm3139J3QK78 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3139J3QK78 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3139J3QK78 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3139J3QK78 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3139J3QK78 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.41■□□□□ 0.7
Gm3139J3QK78 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3139J3QK78 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3139J3QK78 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Gm3139J3QK78 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gm3139J3QK78 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.4■□□□□ 0.7
Gm3139J3QK78 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm3139J3QK78 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm3139J3QK78 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm3139J3QK78 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm3139J3QK78 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm3139J3QK78 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gm3139J3QK78 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gm3139J3QK78 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gm3139J3QK78 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gm3139J3QK78 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Gm3139J3QK78 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.39■□□□□ 0.69
Gm3139J3QK78 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gm3139J3QK78 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Gm3139J3QK78 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm3139J3QK78 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.39■□□□□ 0.69
Gm3139J3QK78 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gm3139J3QK78 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm3139J3QK78 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm3139J3QK78 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gm3139J3QK78 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Gm3139J3QK78 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Gm3139J3QK78 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm3139J3QK78 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm3139J3QK78 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.38■□□□□ 0.69
Gm3139J3QK78 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Gm3139J3QK78 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.38■□□□□ 0.69
Gm3139J3QK78 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.38■□□□□ 0.69
Gm3139J3QK78 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm3139J3QK78 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm3139J3QK78 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm3139J3QK78 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Gm3139J3QK78 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm3139J3QK78 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.38■□□□□ 0.69
Gm3139J3QK78 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Gm3139J3QK78 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm3139J3QK78 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm3139J3QK78 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm3139J3QK78 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm3139J3QK78 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gm3139J3QK78 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms