Protein–RNA interactions for Protein: H3BJZ2

Cdhr4, Cadherin-related family member 4, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr4H3BJZ2 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdhr4H3BJZ2 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Cdhr4H3BJZ2 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdhr4H3BJZ2 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cdhr4H3BJZ2 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cdhr4H3BJZ2 Gm7291-201ENSMUST00000199147 382 ntBASIC17.19■□□□□ 0.34
Cdhr4H3BJZ2 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.19■□□□□ 0.34
Cdhr4H3BJZ2 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cdhr4H3BJZ2 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdhr4H3BJZ2 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdhr4H3BJZ2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdhr4H3BJZ2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdhr4H3BJZ2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.19■□□□□ 0.34
Cdhr4H3BJZ2 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdhr4H3BJZ2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdhr4H3BJZ2 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdhr4H3BJZ2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdhr4H3BJZ2 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdhr4H3BJZ2 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdhr4H3BJZ2 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdhr4H3BJZ2 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Cdhr4H3BJZ2 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdhr4H3BJZ2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdhr4H3BJZ2 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdhr4H3BJZ2 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Cdhr4H3BJZ2 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdhr4H3BJZ2 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.18■□□□□ 0.34
Cdhr4H3BJZ2 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdhr4H3BJZ2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdhr4H3BJZ2 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdhr4H3BJZ2 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdhr4H3BJZ2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdhr4H3BJZ2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdhr4H3BJZ2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cdhr4H3BJZ2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdhr4H3BJZ2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Cdhr4H3BJZ2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdhr4H3BJZ2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdhr4H3BJZ2 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cdhr4H3BJZ2 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cdhr4H3BJZ2 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdhr4H3BJZ2 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdhr4H3BJZ2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdhr4H3BJZ2 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdhr4H3BJZ2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cdhr4H3BJZ2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cdhr4H3BJZ2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdhr4H3BJZ2 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdhr4H3BJZ2 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdhr4H3BJZ2 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Cdhr4H3BJZ2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdhr4H3BJZ2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdhr4H3BJZ2 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdhr4H3BJZ2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cdhr4H3BJZ2 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdhr4H3BJZ2 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Cdhr4H3BJZ2 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cdhr4H3BJZ2 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.16■□□□□ 0.34
Cdhr4H3BJZ2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Cdhr4H3BJZ2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cdhr4H3BJZ2 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdhr4H3BJZ2 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdhr4H3BJZ2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdhr4H3BJZ2 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdhr4H3BJZ2 Gm10849-201ENSMUST00000100397 618 ntBASIC17.15■□□□□ 0.34
Cdhr4H3BJZ2 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.15■□□□□ 0.34
Cdhr4H3BJZ2 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cdhr4H3BJZ2 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Cdhr4H3BJZ2 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdhr4H3BJZ2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdhr4H3BJZ2 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdhr4H3BJZ2 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Cdhr4H3BJZ2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.15■□□□□ 0.34
Cdhr4H3BJZ2 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdhr4H3BJZ2 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.15■□□□□ 0.34
Cdhr4H3BJZ2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdhr4H3BJZ2 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
Cdhr4H3BJZ2 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdhr4H3BJZ2 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdhr4H3BJZ2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.14■□□□□ 0.33
Cdhr4H3BJZ2 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cdhr4H3BJZ2 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.14■□□□□ 0.33
Cdhr4H3BJZ2 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cdhr4H3BJZ2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdhr4H3BJZ2 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdhr4H3BJZ2 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.14■□□□□ 0.33
Cdhr4H3BJZ2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdhr4H3BJZ2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdhr4H3BJZ2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdhr4H3BJZ2 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cdhr4H3BJZ2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cdhr4H3BJZ2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdhr4H3BJZ2 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdhr4H3BJZ2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cdhr4H3BJZ2 Gm27405-201ENSMUST00000184201 112 ntBASIC17.13■□□□□ 0.33
Cdhr4H3BJZ2 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.13■□□□□ 0.33
Cdhr4H3BJZ2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdhr4H3BJZ2 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cdhr4H3BJZ2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdhr4H3BJZ2 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms