Protein–RNA interactions for Protein: E9Q9P8

Rdh16f1, RDH16 family member 1, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh16f1E9Q9P8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.27■□□□□ 0.36
Rdh16f1E9Q9P8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rdh16f1E9Q9P8 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rdh16f1E9Q9P8 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.27■□□□□ 0.36
Rdh16f1E9Q9P8 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.27■□□□□ 0.36
Rdh16f1E9Q9P8 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rdh16f1E9Q9P8 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rdh16f1E9Q9P8 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rdh16f1E9Q9P8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.27■□□□□ 0.36
Rdh16f1E9Q9P8 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rdh16f1E9Q9P8 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.27■□□□□ 0.36
Rdh16f1E9Q9P8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rdh16f1E9Q9P8 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rdh16f1E9Q9P8 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rdh16f1E9Q9P8 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rdh16f1E9Q9P8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rdh16f1E9Q9P8 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rdh16f1E9Q9P8 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.26■□□□□ 0.35
Rdh16f1E9Q9P8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rdh16f1E9Q9P8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rdh16f1E9Q9P8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rdh16f1E9Q9P8 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.26■□□□□ 0.35
Rdh16f1E9Q9P8 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rdh16f1E9Q9P8 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.25■□□□□ 0.35
Rdh16f1E9Q9P8 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Rdh16f1E9Q9P8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Rdh16f1E9Q9P8 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Rdh16f1E9Q9P8 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rdh16f1E9Q9P8 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rdh16f1E9Q9P8 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rdh16f1E9Q9P8 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rdh16f1E9Q9P8 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Rdh16f1E9Q9P8 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rdh16f1E9Q9P8 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Rdh16f1E9Q9P8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.25■□□□□ 0.35
Rdh16f1E9Q9P8 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rdh16f1E9Q9P8 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Rdh16f1E9Q9P8 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rdh16f1E9Q9P8 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rdh16f1E9Q9P8 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rdh16f1E9Q9P8 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rdh16f1E9Q9P8 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Rdh16f1E9Q9P8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rdh16f1E9Q9P8 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rdh16f1E9Q9P8 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rdh16f1E9Q9P8 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Rdh16f1E9Q9P8 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rdh16f1E9Q9P8 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rdh16f1E9Q9P8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rdh16f1E9Q9P8 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Rdh16f1E9Q9P8 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rdh16f1E9Q9P8 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.24■□□□□ 0.35
Rdh16f1E9Q9P8 Gm6139-201ENSMUST00000079261 882 ntBASIC17.24■□□□□ 0.35
Rdh16f1E9Q9P8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rdh16f1E9Q9P8 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rdh16f1E9Q9P8 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Rdh16f1E9Q9P8 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rdh16f1E9Q9P8 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rdh16f1E9Q9P8 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Rdh16f1E9Q9P8 AA386476-201ENSMUST00000098781 1665 ntBASIC17.23■□□□□ 0.35
Rdh16f1E9Q9P8 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rdh16f1E9Q9P8 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rdh16f1E9Q9P8 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rdh16f1E9Q9P8 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rdh16f1E9Q9P8 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rdh16f1E9Q9P8 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Rdh16f1E9Q9P8 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rdh16f1E9Q9P8 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Rdh16f1E9Q9P8 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rdh16f1E9Q9P8 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.22■□□□□ 0.35
Rdh16f1E9Q9P8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
Rdh16f1E9Q9P8 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.22■□□□□ 0.35
Rdh16f1E9Q9P8 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rdh16f1E9Q9P8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Rdh16f1E9Q9P8 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rdh16f1E9Q9P8 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Rdh16f1E9Q9P8 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rdh16f1E9Q9P8 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rdh16f1E9Q9P8 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rdh16f1E9Q9P8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rdh16f1E9Q9P8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rdh16f1E9Q9P8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rdh16f1E9Q9P8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rdh16f1E9Q9P8 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rdh16f1E9Q9P8 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rdh16f1E9Q9P8 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.21■□□□□ 0.35
Rdh16f1E9Q9P8 Gm43173-201ENSMUST00000202246 593 ntBASIC17.21■□□□□ 0.35
Rdh16f1E9Q9P8 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rdh16f1E9Q9P8 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.21■□□□□ 0.35
Rdh16f1E9Q9P8 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rdh16f1E9Q9P8 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rdh16f1E9Q9P8 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rdh16f1E9Q9P8 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rdh16f1E9Q9P8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rdh16f1E9Q9P8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Rdh16f1E9Q9P8 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rdh16f1E9Q9P8 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rdh16f1E9Q9P8 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rdh16f1E9Q9P8 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rdh16f1E9Q9P8 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms