Protein–RNA interactions for Protein: E9PXX9

Slc28a1, Sodium/nucleoside cotransporter, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a1E9PXX9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc28a1E9PXX9 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.32■□□□□ 0.52
Slc28a1E9PXX9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.32■□□□□ 0.52
Slc28a1E9PXX9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc28a1E9PXX9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc28a1E9PXX9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Slc28a1E9PXX9 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc28a1E9PXX9 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Slc28a1E9PXX9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Slc28a1E9PXX9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc28a1E9PXX9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Slc28a1E9PXX9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.31■□□□□ 0.52
Slc28a1E9PXX9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc28a1E9PXX9 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.31■□□□□ 0.52
Slc28a1E9PXX9 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc28a1E9PXX9 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.31■□□□□ 0.52
Slc28a1E9PXX9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Slc28a1E9PXX9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Slc28a1E9PXX9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Slc28a1E9PXX9 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc28a1E9PXX9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc28a1E9PXX9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.3■□□□□ 0.52
Slc28a1E9PXX9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc28a1E9PXX9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.3■□□□□ 0.52
Slc28a1E9PXX9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.3■□□□□ 0.52
Slc28a1E9PXX9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc28a1E9PXX9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc28a1E9PXX9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Slc28a1E9PXX9 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc28a1E9PXX9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc28a1E9PXX9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc28a1E9PXX9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc28a1E9PXX9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc28a1E9PXX9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc28a1E9PXX9 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc28a1E9PXX9 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc28a1E9PXX9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc28a1E9PXX9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.29■□□□□ 0.52
Slc28a1E9PXX9 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Slc28a1E9PXX9 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
Slc28a1E9PXX9 Gm5921-201ENSMUST00000075898 882 ntBASIC18.29■□□□□ 0.52
Slc28a1E9PXX9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc28a1E9PXX9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc28a1E9PXX9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc28a1E9PXX9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc28a1E9PXX9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc28a1E9PXX9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Slc28a1E9PXX9 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc28a1E9PXX9 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.28■□□□□ 0.52
Slc28a1E9PXX9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Slc28a1E9PXX9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc28a1E9PXX9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc28a1E9PXX9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Slc28a1E9PXX9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc28a1E9PXX9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc28a1E9PXX9 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Slc28a1E9PXX9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc28a1E9PXX9 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.27■□□□□ 0.52
Slc28a1E9PXX9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Slc28a1E9PXX9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc28a1E9PXX9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.27■□□□□ 0.52
Slc28a1E9PXX9 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Slc28a1E9PXX9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Slc28a1E9PXX9 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.27■□□□□ 0.52
Slc28a1E9PXX9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.51
Slc28a1E9PXX9 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Slc28a1E9PXX9 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.27■□□□□ 0.51
Slc28a1E9PXX9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc28a1E9PXX9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc28a1E9PXX9 BC021767-201ENSMUST00000126387 1716 ntBASIC18.26■□□□□ 0.51
Slc28a1E9PXX9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Slc28a1E9PXX9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Slc28a1E9PXX9 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc28a1E9PXX9 Gm43566-201ENSMUST00000196851 808 ntBASIC18.26■□□□□ 0.51
Slc28a1E9PXX9 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc28a1E9PXX9 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc28a1E9PXX9 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Slc28a1E9PXX9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc28a1E9PXX9 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc28a1E9PXX9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc28a1E9PXX9 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.26■□□□□ 0.51
Slc28a1E9PXX9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc28a1E9PXX9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc28a1E9PXX9 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.25■□□□□ 0.51
Slc28a1E9PXX9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Slc28a1E9PXX9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Slc28a1E9PXX9 Gm13238-201ENSMUST00000117655 780 ntBASIC18.25■□□□□ 0.51
Slc28a1E9PXX9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Slc28a1E9PXX9 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.25■□□□□ 0.51
Slc28a1E9PXX9 Gm43530-201ENSMUST00000195920 274 ntBASIC18.25■□□□□ 0.51
Slc28a1E9PXX9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Slc28a1E9PXX9 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc28a1E9PXX9 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc28a1E9PXX9 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.25■□□□□ 0.51
Slc28a1E9PXX9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc28a1E9PXX9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.24■□□□□ 0.51
Slc28a1E9PXX9 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc28a1E9PXX9 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Slc28a1E9PXX9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.24■□□□□ 0.51
Slc28a1E9PXX9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms