Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC21.04■□□□□ 0.96
Ptchd4B9EKX1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ptchd4B9EKX1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Ptchd4B9EKX1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.04■□□□□ 0.96
Ptchd4B9EKX1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Ptchd4B9EKX1 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
Ptchd4B9EKX1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ptchd4B9EKX1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ptchd4B9EKX1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ptchd4B9EKX1 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Ptchd4B9EKX1 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Ptchd4B9EKX1 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.02■□□□□ 0.96
Ptchd4B9EKX1 AC112142.1-201ENSMUST00000228796 918 ntBASIC21.02■□□□□ 0.96
Ptchd4B9EKX1 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ptchd4B9EKX1 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ptchd4B9EKX1 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ptchd4B9EKX1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ptchd4B9EKX1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
Ptchd4B9EKX1 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ptchd4B9EKX1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Ptchd4B9EKX1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ptchd4B9EKX1 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Ptchd4B9EKX1 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ptchd4B9EKX1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Ptchd4B9EKX1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ptchd4B9EKX1 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Ptchd4B9EKX1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
Ptchd4B9EKX1 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ptchd4B9EKX1 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC21■□□□□ 0.95
Ptchd4B9EKX1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21■□□□□ 0.95
Ptchd4B9EKX1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ptchd4B9EKX1 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ptchd4B9EKX1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21■□□□□ 0.95
Ptchd4B9EKX1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ptchd4B9EKX1 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ptchd4B9EKX1 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Ptchd4B9EKX1 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.99■□□□□ 0.95
Ptchd4B9EKX1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.99■□□□□ 0.95
Ptchd4B9EKX1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Ptchd4B9EKX1 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ptchd4B9EKX1 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ptchd4B9EKX1 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Ptchd4B9EKX1 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ptchd4B9EKX1 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.98■□□□□ 0.95
Ptchd4B9EKX1 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ptchd4B9EKX1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ptchd4B9EKX1 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Ptchd4B9EKX1 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ptchd4B9EKX1 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.98■□□□□ 0.95
Ptchd4B9EKX1 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ptchd4B9EKX1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ptchd4B9EKX1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ptchd4B9EKX1 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ptchd4B9EKX1 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.97■□□□□ 0.95
Ptchd4B9EKX1 Mir5133-201ENSMUST00000174955 77 ntBASIC20.97■□□□□ 0.95
Ptchd4B9EKX1 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Ptchd4B9EKX1 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.96■□□□□ 0.95
Ptchd4B9EKX1 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
Ptchd4B9EKX1 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ptchd4B9EKX1 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ptchd4B9EKX1 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.96■□□□□ 0.95
Ptchd4B9EKX1 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Ptchd4B9EKX1 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ptchd4B9EKX1 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Ptchd4B9EKX1 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ptchd4B9EKX1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.95■□□□□ 0.95
Ptchd4B9EKX1 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ptchd4B9EKX1 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.95■□□□□ 0.94
Ptchd4B9EKX1 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
Ptchd4B9EKX1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
Ptchd4B9EKX1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ptchd4B9EKX1 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ptchd4B9EKX1 Gm13534-201ENSMUST00000121169 513 ntBASIC20.94■□□□□ 0.94
Ptchd4B9EKX1 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.94■□□□□ 0.94
Ptchd4B9EKX1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ptchd4B9EKX1 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ptchd4B9EKX1 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ptchd4B9EKX1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ptchd4B9EKX1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.93■□□□□ 0.94
Ptchd4B9EKX1 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.93■□□□□ 0.94
Ptchd4B9EKX1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.93■□□□□ 0.94
Ptchd4B9EKX1 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ptchd4B9EKX1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Ptchd4B9EKX1 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Ptchd4B9EKX1 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.93■□□□□ 0.94
Ptchd4B9EKX1 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ptchd4B9EKX1 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ptchd4B9EKX1 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ptchd4B9EKX1 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.92■□□□□ 0.94
Ptchd4B9EKX1 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Ptchd4B9EKX1 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.92■□□□□ 0.94
Ptchd4B9EKX1 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.92■□□□□ 0.94
Ptchd4B9EKX1 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ptchd4B9EKX1 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ptchd4B9EKX1 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ptchd4B9EKX1 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Ptchd4B9EKX1 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ptchd4B9EKX1 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.92■□□□□ 0.94
Ptchd4B9EKX1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Ptchd4B9EKX1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms