Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sh2d4bA6X942 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Sh2d4bA6X942 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Sh2d4bA6X942 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sh2d4bA6X942 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
Sh2d4bA6X942 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sh2d4bA6X942 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sh2d4bA6X942 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sh2d4bA6X942 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Sh2d4bA6X942 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Sh2d4bA6X942 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Sh2d4bA6X942 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sh2d4bA6X942 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sh2d4bA6X942 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Sh2d4bA6X942 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sh2d4bA6X942 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sh2d4bA6X942 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.74■□□□□ 0.91
Sh2d4bA6X942 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.74■□□□□ 0.91
Sh2d4bA6X942 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sh2d4bA6X942 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sh2d4bA6X942 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sh2d4bA6X942 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sh2d4bA6X942 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.74■□□□□ 0.91
Sh2d4bA6X942 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.74■□□□□ 0.91
Sh2d4bA6X942 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sh2d4bA6X942 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sh2d4bA6X942 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Sh2d4bA6X942 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Sh2d4bA6X942 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sh2d4bA6X942 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sh2d4bA6X942 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.73■□□□□ 0.91
Sh2d4bA6X942 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sh2d4bA6X942 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sh2d4bA6X942 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sh2d4bA6X942 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sh2d4bA6X942 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Sh2d4bA6X942 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Sh2d4bA6X942 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh2d4bA6X942 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh2d4bA6X942 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh2d4bA6X942 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh2d4bA6X942 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.72■□□□□ 0.91
Sh2d4bA6X942 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Sh2d4bA6X942 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Sh2d4bA6X942 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.72■□□□□ 0.91
Sh2d4bA6X942 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.72■□□□□ 0.91
Sh2d4bA6X942 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh2d4bA6X942 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.72■□□□□ 0.91
Sh2d4bA6X942 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh2d4bA6X942 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh2d4bA6X942 Gm9988-201ENSMUST00000069786 435 ntBASIC20.72■□□□□ 0.91
Sh2d4bA6X942 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh2d4bA6X942 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh2d4bA6X942 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Sh2d4bA6X942 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Sh2d4bA6X942 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sh2d4bA6X942 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Sh2d4bA6X942 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sh2d4bA6X942 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Sh2d4bA6X942 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sh2d4bA6X942 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Sh2d4bA6X942 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Sh2d4bA6X942 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Sh2d4bA6X942 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Sh2d4bA6X942 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.71■□□□□ 0.91
Sh2d4bA6X942 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.71■□□□□ 0.91
Sh2d4bA6X942 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
Sh2d4bA6X942 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sh2d4bA6X942 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sh2d4bA6X942 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sh2d4bA6X942 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.71■□□□□ 0.91
Sh2d4bA6X942 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sh2d4bA6X942 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sh2d4bA6X942 Nespas-201ENSMUST00000143738 1083 ntBASIC20.7■□□□□ 0.9
Sh2d4bA6X942 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Sh2d4bA6X942 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
Sh2d4bA6X942 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sh2d4bA6X942 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sh2d4bA6X942 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sh2d4bA6X942 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sh2d4bA6X942 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sh2d4bA6X942 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh2d4bA6X942 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh2d4bA6X942 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh2d4bA6X942 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh2d4bA6X942 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Sh2d4bA6X942 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh2d4bA6X942 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh2d4bA6X942 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh2d4bA6X942 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh2d4bA6X942 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Sh2d4bA6X942 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Sh2d4bA6X942 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh2d4bA6X942 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sh2d4bA6X942 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Sh2d4bA6X942 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Sh2d4bA6X942 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sh2d4bA6X942 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.68■□□□□ 0.9
Sh2d4bA6X942 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sh2d4bA6X942 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms