Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col6a4A2AX52 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col6a4A2AX52 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col6a4A2AX52 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.41■□□□□ 0.22
Col6a4A2AX52 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Col6a4A2AX52 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Col6a4A2AX52 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.41■□□□□ 0.22
Col6a4A2AX52 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col6a4A2AX52 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col6a4A2AX52 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Col6a4A2AX52 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col6a4A2AX52 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col6a4A2AX52 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.41■□□□□ 0.22
Col6a4A2AX52 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col6a4A2AX52 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col6a4A2AX52 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col6a4A2AX52 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col6a4A2AX52 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.4■□□□□ 0.22
Col6a4A2AX52 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col6a4A2AX52 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.4■□□□□ 0.22
Col6a4A2AX52 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col6a4A2AX52 Trmt13-210ENSMUST00000198454 880 ntBASIC16.4■□□□□ 0.22
Col6a4A2AX52 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col6a4A2AX52 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Col6a4A2AX52 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Col6a4A2AX52 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
Col6a4A2AX52 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Col6a4A2AX52 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col6a4A2AX52 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.4■□□□□ 0.22
Col6a4A2AX52 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.4■□□□□ 0.22
Col6a4A2AX52 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Col6a4A2AX52 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Col6a4A2AX52 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.39■□□□□ 0.21
Col6a4A2AX52 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.39■□□□□ 0.21
Col6a4A2AX52 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col6a4A2AX52 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Col6a4A2AX52 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC16.39■□□□□ 0.21
Col6a4A2AX52 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.39■□□□□ 0.21
Col6a4A2AX52 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col6a4A2AX52 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col6a4A2AX52 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col6a4A2AX52 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC16.39■□□□□ 0.21
Col6a4A2AX52 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col6a4A2AX52 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Col6a4A2AX52 Gm5643-201ENSMUST00000117081 966 ntBASIC16.39■□□□□ 0.21
Col6a4A2AX52 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col6a4A2AX52 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col6a4A2AX52 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col6a4A2AX52 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col6a4A2AX52 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col6a4A2AX52 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col6a4A2AX52 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.38■□□□□ 0.21
Col6a4A2AX52 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Col6a4A2AX52 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Col6a4A2AX52 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col6a4A2AX52 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col6a4A2AX52 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col6a4A2AX52 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Col6a4A2AX52 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col6a4A2AX52 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.38■□□□□ 0.21
Col6a4A2AX52 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Col6a4A2AX52 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Col6a4A2AX52 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col6a4A2AX52 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col6a4A2AX52 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col6a4A2AX52 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Col6a4A2AX52 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col6a4A2AX52 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Col6a4A2AX52 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Col6a4A2AX52 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.37■□□□□ 0.21
Col6a4A2AX52 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Col6a4A2AX52 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col6a4A2AX52 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col6a4A2AX52 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.36■□□□□ 0.21
Col6a4A2AX52 Gm13534-201ENSMUST00000121169 513 ntBASIC16.36■□□□□ 0.21
Col6a4A2AX52 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col6a4A2AX52 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col6a4A2AX52 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col6a4A2AX52 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col6a4A2AX52 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col6a4A2AX52 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.36■□□□□ 0.21
Col6a4A2AX52 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col6a4A2AX52 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.36■□□□□ 0.21
Col6a4A2AX52 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.36■□□□□ 0.21
Col6a4A2AX52 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col6a4A2AX52 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col6a4A2AX52 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Col6a4A2AX52 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col6a4A2AX52 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Col6a4A2AX52 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col6a4A2AX52 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col6a4A2AX52 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Col6a4A2AX52 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC16.35■□□□□ 0.21
Col6a4A2AX52 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col6a4A2AX52 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col6a4A2AX52 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col6a4A2AX52 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Col6a4A2AX52 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.35■□□□□ 0.21
Col6a4A2AX52 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Col6a4A2AX52 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 201.4 ms