Protein–RNA interactions for Protein: A1L3P4

Slc9a6, Sodium/hydrogen exchanger, mousemouse

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc9a6A1L3P4 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc9a6A1L3P4 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Slc9a6A1L3P4 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc9a6A1L3P4 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc9a6A1L3P4 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc9a6A1L3P4 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Slc9a6A1L3P4 Golph3-202ENSMUST00000226517 2359 ntBASIC18.26■□□□□ 0.51
Slc9a6A1L3P4 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc9a6A1L3P4 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc9a6A1L3P4 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc9a6A1L3P4 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Slc9a6A1L3P4 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.25■□□□□ 0.51
Slc9a6A1L3P4 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.25■□□□□ 0.51
Slc9a6A1L3P4 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc9a6A1L3P4 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc9a6A1L3P4 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Slc9a6A1L3P4 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc9a6A1L3P4 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc9a6A1L3P4 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc9a6A1L3P4 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc9a6A1L3P4 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Slc9a6A1L3P4 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.24■□□□□ 0.51
Slc9a6A1L3P4 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc9a6A1L3P4 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc9a6A1L3P4 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc9a6A1L3P4 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc9a6A1L3P4 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc9a6A1L3P4 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Slc9a6A1L3P4 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc9a6A1L3P4 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc9a6A1L3P4 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc9a6A1L3P4 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Slc9a6A1L3P4 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc9a6A1L3P4 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Slc9a6A1L3P4 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
Slc9a6A1L3P4 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc9a6A1L3P4 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.22■□□□□ 0.51
Slc9a6A1L3P4 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc9a6A1L3P4 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc9a6A1L3P4 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc9a6A1L3P4 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.22■□□□□ 0.51
Slc9a6A1L3P4 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Slc9a6A1L3P4 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc9a6A1L3P4 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc9a6A1L3P4 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc9a6A1L3P4 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc9a6A1L3P4 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Slc9a6A1L3P4 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.21■□□□□ 0.51
Slc9a6A1L3P4 Gm21956-201ENSMUST00000179946 522 ntBASIC18.21■□□□□ 0.51
Slc9a6A1L3P4 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc9a6A1L3P4 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Slc9a6A1L3P4 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.21■□□□□ 0.51
Slc9a6A1L3P4 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc9a6A1L3P4 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc9a6A1L3P4 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.21■□□□□ 0.5
Slc9a6A1L3P4 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc9a6A1L3P4 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Slc9a6A1L3P4 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc9a6A1L3P4 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.2■□□□□ 0.5
Slc9a6A1L3P4 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc9a6A1L3P4 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Slc9a6A1L3P4 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Slc9a6A1L3P4 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Slc9a6A1L3P4 Gm43137-201ENSMUST00000198052 594 ntBASIC18.2■□□□□ 0.5
Slc9a6A1L3P4 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.2■□□□□ 0.5
Slc9a6A1L3P4 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Slc9a6A1L3P4 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.2■□□□□ 0.5
Slc9a6A1L3P4 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Slc9a6A1L3P4 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc9a6A1L3P4 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc9a6A1L3P4 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Slc9a6A1L3P4 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.2■□□□□ 0.5
Slc9a6A1L3P4 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc9a6A1L3P4 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Slc9a6A1L3P4 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc9a6A1L3P4 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Slc9a6A1L3P4 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.19■□□□□ 0.5
Slc9a6A1L3P4 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.19■□□□□ 0.5
Slc9a6A1L3P4 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc9a6A1L3P4 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Slc9a6A1L3P4 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc9a6A1L3P4 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc9a6A1L3P4 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc9a6A1L3P4 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.18■□□□□ 0.5
Slc9a6A1L3P4 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.18■□□□□ 0.5
Slc9a6A1L3P4 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc9a6A1L3P4 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Slc9a6A1L3P4 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Slc9a6A1L3P4 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc9a6A1L3P4 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Slc9a6A1L3P4 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Slc9a6A1L3P4 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.17■□□□□ 0.5
Slc9a6A1L3P4 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.17■□□□□ 0.5
Slc9a6A1L3P4 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc9a6A1L3P4 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc9a6A1L3P4 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Slc9a6A1L3P4 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc9a6A1L3P4 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc9a6A1L3P4 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc9a6A1L3P4 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms