Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smim17A0A504 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smim17A0A504 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.64■□□□□ 0.41
Smim17A0A504 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smim17A0A504 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.64■□□□□ 0.41
Smim17A0A504 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smim17A0A504 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smim17A0A504 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smim17A0A504 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smim17A0A504 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smim17A0A504 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Smim17A0A504 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smim17A0A504 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smim17A0A504 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smim17A0A504 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smim17A0A504 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Smim17A0A504 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smim17A0A504 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smim17A0A504 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smim17A0A504 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smim17A0A504 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smim17A0A504 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smim17A0A504 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Smim17A0A504 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.63■□□□□ 0.41
Smim17A0A504 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smim17A0A504 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smim17A0A504 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Smim17A0A504 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smim17A0A504 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smim17A0A504 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smim17A0A504 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smim17A0A504 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smim17A0A504 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smim17A0A504 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Smim17A0A504 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smim17A0A504 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smim17A0A504 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Smim17A0A504 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smim17A0A504 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smim17A0A504 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smim17A0A504 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smim17A0A504 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smim17A0A504 BC021767-201ENSMUST00000126387 1716 ntBASIC17.61■□□□□ 0.41
Smim17A0A504 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smim17A0A504 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.61■□□□□ 0.41
Smim17A0A504 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Smim17A0A504 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.61■□□□□ 0.41
Smim17A0A504 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.61■□□□□ 0.41
Smim17A0A504 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.61■□□□□ 0.41
Smim17A0A504 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smim17A0A504 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smim17A0A504 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smim17A0A504 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Smim17A0A504 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smim17A0A504 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Smim17A0A504 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smim17A0A504 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smim17A0A504 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smim17A0A504 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smim17A0A504 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Smim17A0A504 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smim17A0A504 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smim17A0A504 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Smim17A0A504 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.59■□□□□ 0.41
Smim17A0A504 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smim17A0A504 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Smim17A0A504 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Smim17A0A504 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Smim17A0A504 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smim17A0A504 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.59■□□□□ 0.41
Smim17A0A504 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Smim17A0A504 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smim17A0A504 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Smim17A0A504 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smim17A0A504 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Smim17A0A504 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smim17A0A504 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Smim17A0A504 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smim17A0A504 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smim17A0A504 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smim17A0A504 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smim17A0A504 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Smim17A0A504 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smim17A0A504 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Smim17A0A504 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smim17A0A504 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Smim17A0A504 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smim17A0A504 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smim17A0A504 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smim17A0A504 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smim17A0A504 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smim17A0A504 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smim17A0A504 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.58■□□□□ 0.4
Smim17A0A504 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smim17A0A504 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smim17A0A504 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smim17A0A504 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smim17A0A504 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smim17A0A504 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smim17A0A504 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms