Protein–RNA interactions for Protein: A0A140T8T4

Rpl9-ps6, Ribosomal protein L9, pseudogene 6, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl9-ps6A0A140T8T4 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.01■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.01■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.01■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.01■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Rpl9-ps6A0A140T8T4 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rpl9-ps6A0A140T8T4 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.99■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpl9-ps6A0A140T8T4 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpl9-ps6A0A140T8T4 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.98■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.98■□□□□ 0.79
Rpl9-ps6A0A140T8T4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.97■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpl9-ps6A0A140T8T4 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpl9-ps6A0A140T8T4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.97■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.97■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.96■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Gm18671-201ENSMUST00000214826 683 ntBASIC19.96■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Rpl9-ps6A0A140T8T4 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpl9-ps6A0A140T8T4 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rpl9-ps6A0A140T8T4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpl9-ps6A0A140T8T4 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
Rpl9-ps6A0A140T8T4 Gm10033-202ENSMUST00000211874 928 ntBASIC19.95■□□□□ 0.78
Rpl9-ps6A0A140T8T4 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.95■□□□□ 0.78
Rpl9-ps6A0A140T8T4 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Rpl9-ps6A0A140T8T4 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rpl9-ps6A0A140T8T4 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpl9-ps6A0A140T8T4 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpl9-ps6A0A140T8T4 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Rpl9-ps6A0A140T8T4 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpl9-ps6A0A140T8T4 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Rpl9-ps6A0A140T8T4 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms