Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhgb8A0A140LI48 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.47■□□□□ 0.39
Pcdhgb8A0A140LI48 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhgb8A0A140LI48 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.47■□□□□ 0.39
Pcdhgb8A0A140LI48 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhgb8A0A140LI48 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhgb8A0A140LI48 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhgb8A0A140LI48 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhgb8A0A140LI48 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhgb8A0A140LI48 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhgb8A0A140LI48 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhgb8A0A140LI48 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhgb8A0A140LI48 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhgb8A0A140LI48 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhgb8A0A140LI48 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhgb8A0A140LI48 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.46■□□□□ 0.39
Pcdhgb8A0A140LI48 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.46■□□□□ 0.39
Pcdhgb8A0A140LI48 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.46■□□□□ 0.39
Pcdhgb8A0A140LI48 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhgb8A0A140LI48 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.46■□□□□ 0.39
Pcdhgb8A0A140LI48 Gm7143-201ENSMUST00000222811 859 ntBASIC17.46■□□□□ 0.39
Pcdhgb8A0A140LI48 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhgb8A0A140LI48 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhgb8A0A140LI48 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhgb8A0A140LI48 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhgb8A0A140LI48 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Pcdhgb8A0A140LI48 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Pcdhgb8A0A140LI48 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pcdhgb8A0A140LI48 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.46■□□□□ 0.38
Pcdhgb8A0A140LI48 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgb8A0A140LI48 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgb8A0A140LI48 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgb8A0A140LI48 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgb8A0A140LI48 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgb8A0A140LI48 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.45■□□□□ 0.38
Pcdhgb8A0A140LI48 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgb8A0A140LI48 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
Pcdhgb8A0A140LI48 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgb8A0A140LI48 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgb8A0A140LI48 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgb8A0A140LI48 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.44■□□□□ 0.38
Pcdhgb8A0A140LI48 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.44■□□□□ 0.38
Pcdhgb8A0A140LI48 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgb8A0A140LI48 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgb8A0A140LI48 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Pcdhgb8A0A140LI48 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgb8A0A140LI48 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.44■□□□□ 0.38
Pcdhgb8A0A140LI48 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgb8A0A140LI48 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Pcdhgb8A0A140LI48 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Pcdhgb8A0A140LI48 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgb8A0A140LI48 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Pcdhgb8A0A140LI48 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgb8A0A140LI48 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgb8A0A140LI48 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgb8A0A140LI48 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgb8A0A140LI48 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgb8A0A140LI48 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgb8A0A140LI48 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgb8A0A140LI48 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgb8A0A140LI48 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgb8A0A140LI48 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgb8A0A140LI48 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgb8A0A140LI48 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgb8A0A140LI48 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhgb8A0A140LI48 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgb8A0A140LI48 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.43■□□□□ 0.38
Pcdhgb8A0A140LI48 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb8A0A140LI48 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb8A0A140LI48 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb8A0A140LI48 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb8A0A140LI48 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.42■□□□□ 0.38
Pcdhgb8A0A140LI48 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb8A0A140LI48 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb8A0A140LI48 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb8A0A140LI48 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb8A0A140LI48 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhgb8A0A140LI48 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb8A0A140LI48 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Pcdhgb8A0A140LI48 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb8A0A140LI48 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb8A0A140LI48 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Pcdhgb8A0A140LI48 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb8A0A140LI48 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Pcdhgb8A0A140LI48 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb8A0A140LI48 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb8A0A140LI48 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb8A0A140LI48 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.41■□□□□ 0.38
Pcdhgb8A0A140LI48 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb8A0A140LI48 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.41■□□□□ 0.38
Pcdhgb8A0A140LI48 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb8A0A140LI48 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb8A0A140LI48 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb8A0A140LI48 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb8A0A140LI48 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Pcdhgb8A0A140LI48 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Pcdhgb8A0A140LI48 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb8A0A140LI48 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb8A0A140LI48 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.4■□□□□ 0.38
Pcdhgb8A0A140LI48 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms