Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav13n-4A0A0G2JG01 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav13n-4A0A0G2JG01 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav13n-4A0A0G2JG01 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.73■□□□□ 0.11
Trav13n-4A0A0G2JG01 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13n-4A0A0G2JG01 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13n-4A0A0G2JG01 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13n-4A0A0G2JG01 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13n-4A0A0G2JG01 Gm8770-201ENSMUST00000121113 1109 ntBASIC15.72■□□□□ 0.11
Trav13n-4A0A0G2JG01 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC15.72■□□□□ 0.11
Trav13n-4A0A0G2JG01 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13n-4A0A0G2JG01 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav13n-4A0A0G2JG01 Gm43759-201ENSMUST00000196925 1261 ntBASIC15.72■□□□□ 0.11
Trav13n-4A0A0G2JG01 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
Trav13n-4A0A0G2JG01 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13n-4A0A0G2JG01 Gm5576-201ENSMUST00000075809 1236 ntBASIC15.72■□□□□ 0.11
Trav13n-4A0A0G2JG01 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13n-4A0A0G2JG01 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13n-4A0A0G2JG01 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13n-4A0A0G2JG01 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13n-4A0A0G2JG01 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13n-4A0A0G2JG01 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13n-4A0A0G2JG01 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13n-4A0A0G2JG01 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13n-4A0A0G2JG01 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13n-4A0A0G2JG01 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13n-4A0A0G2JG01 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13n-4A0A0G2JG01 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13n-4A0A0G2JG01 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13n-4A0A0G2JG01 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Trav13n-4A0A0G2JG01 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13n-4A0A0G2JG01 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13n-4A0A0G2JG01 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13n-4A0A0G2JG01 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13n-4A0A0G2JG01 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trav13n-4A0A0G2JG01 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trav13n-4A0A0G2JG01 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13n-4A0A0G2JG01 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13n-4A0A0G2JG01 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trav13n-4A0A0G2JG01 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13n-4A0A0G2JG01 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13n-4A0A0G2JG01 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13n-4A0A0G2JG01 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trav13n-4A0A0G2JG01 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13n-4A0A0G2JG01 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trav13n-4A0A0G2JG01 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trav13n-4A0A0G2JG01 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13n-4A0A0G2JG01 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13n-4A0A0G2JG01 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Trav13n-4A0A0G2JG01 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trav13n-4A0A0G2JG01 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trav13n-4A0A0G2JG01 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav13n-4A0A0G2JG01 Gm15043-201ENSMUST00000118843 1543 ntBASIC15.69■□□□□ 0.1
Trav13n-4A0A0G2JG01 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav13n-4A0A0G2JG01 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Trav13n-4A0A0G2JG01 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC15.69■□□□□ 0.1
Trav13n-4A0A0G2JG01 Krt8-ps-201ENSMUST00000208495 945 ntBASIC15.69■□□□□ 0.1
Trav13n-4A0A0G2JG01 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav13n-4A0A0G2JG01 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC15.69■□□□□ 0.1
Trav13n-4A0A0G2JG01 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav13n-4A0A0G2JG01 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav13n-4A0A0G2JG01 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav13n-4A0A0G2JG01 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav13n-4A0A0G2JG01 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC15.68■□□□□ 0.1
Trav13n-4A0A0G2JG01 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13n-4A0A0G2JG01 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13n-4A0A0G2JG01 Gm10616-201ENSMUST00000205285 2127 ntBASIC15.68■□□□□ 0.1
Trav13n-4A0A0G2JG01 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trav13n-4A0A0G2JG01 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13n-4A0A0G2JG01 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC15.68■□□□□ 0.1
Trav13n-4A0A0G2JG01 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13n-4A0A0G2JG01 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13n-4A0A0G2JG01 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav13n-4A0A0G2JG01 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav13n-4A0A0G2JG01 Gm10657-201ENSMUST00000193528 1031 ntBASIC15.68■□□□□ 0.1
Trav13n-4A0A0G2JG01 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13n-4A0A0G2JG01 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13n-4A0A0G2JG01 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav13n-4A0A0G2JG01 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13n-4A0A0G2JG01 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13n-4A0A0G2JG01 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Trav13n-4A0A0G2JG01 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav13n-4A0A0G2JG01 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav13n-4A0A0G2JG01 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav13n-4A0A0G2JG01 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.67■□□□□ 0.1
Trav13n-4A0A0G2JG01 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC15.67■□□□□ 0.1
Trav13n-4A0A0G2JG01 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav13n-4A0A0G2JG01 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav13n-4A0A0G2JG01 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav13n-4A0A0G2JG01 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav13n-4A0A0G2JG01 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav13n-4A0A0G2JG01 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.67■□□□□ 0.1
Trav13n-4A0A0G2JG01 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trav13n-4A0A0G2JG01 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trav13n-4A0A0G2JG01 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav13n-4A0A0G2JG01 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav13n-4A0A0G2JG01 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav13n-4A0A0G2JG01 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav13n-4A0A0G2JG01 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC15.66■□□□□ 0.1
Trav13n-4A0A0G2JG01 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms